Top 10 genes with highest correlation to Rv0576/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2695/- | (cc=0.5209) | info on Rv2695/- |
| Rv3847/- | (cc=0.5112) | info on Rv3847/- |
| Rv3050c/- | (cc=0.498) | info on Rv3050c/- |
| Rv1752/- | (cc=0.4943) | info on Rv1752/- |
| Rv3521/- | (cc=0.4913) | info on Rv3521/- |
| Rv0222/echA1 | (cc=0.4889) | info on Rv0222/echA1 |
| Rv2857c/- | (cc=0.4882) | info on Rv2857c/- |
| Rv3398c/idsA1 | (cc=0.488) | info on Rv3398c/idsA1 |
| Rv0647c/- | (cc=0.4856) | info on Rv0647c/- |
| Rv1128c/- | (cc=0.4766) | info on Rv1128c/- |
Correlation of Rv0576/- with Rv0222/echA1
Normalized LFCs for Rv0576/-:
(description and provenance of datasets)
| Rv0576/- | Rv0222/echA1 | |
| Fe_supp_jason_reseq | -0.308 | -3.435 |
| low_pH_jason_reseq | -0.475 | -2.431 |
| NO_jason_reseq | -0.205 | 0.465 |
| B6_jason_reseq | -1.345 | -3.258 |
| MHCII_jason_reseq | -0.823 | -1.782 |
| Isoniazid02 | 0.422 | -0.8 |
| Rifampicin4 | -0.292 | -0.582 |
| Ethambutol3 | 0.311 | -0.164 |
| Meropenem3 | -0.374 | -0.258 |
| Vancomycin16 | 0.082 | -0.57 |
| Rv2680_day32 | 0.725 | -0.048 |
| H37Rv_KO_MarP | 0.529 | -0.138 |
| hypoxia_3wks | 0.06 | 0.63 |
| hypoxia_6wks | 0.319 | -0.065 |
| glycerol | -1.257 | -0.035 |
| cholesterol | 0.345 | 0.861 |
| AJ | -0.062 | 0.442 |
| Bibs02 | 0.494 | -0.237 |
| Bibs02c | -0.611 | -0.887 |
| BL6 | -0.841 | 1.376 |
| BL6a | 0.319 | 0.672 |
| BXD01 | 0.926 | -0.046 |
| BXD010 | 0.953 | -0.191 |
| BXD011 | 0.639 | 1.09 |
| BXD03 | -0.279 | 1.092 |
| BXD04 | 0.42 | 2.172 |
| BXD05 | 1.16 | 1.202 |
| BXD06 | 1.095 | 0.293 |
| BXD07 | -0.037 | 0.891 |
| BXD08 | 1.008 | 1.148 |
| BXD09 | 0.57 | 0.863 |
| CAST | -0.26 | 0.662 |
| CCcont | 0.223 | 0.75 |
| DS01 | -0.267 | -0.306 |
| DS02 | -0.878 | 0.625 |
| DS04 | 1.067 | 2.54 |
| DS0c | -0.379 | 0.317 |
| GP01 | 0.511 | 1.765 |
| GP02 | 2.078 | 1.928 |
| GP0c | 1.018 | 1.358 |
| NOD | 0.06 | 1.741 |
| NZO | 0.104 | -0.035 |
| PWK | -0.193 | -0.78 |
| H37Rv_KO_CtpC | 0.405 | 0.028 |
| H37Rv_KO_CtpD | 0.656 | 1.355 |
| H37Rv_KO_Rv1272 | 0.585 | -0.025 |
| H37Rv_KO_SugABC | -0.99 | 0.682 |
| H37Rv_KO_MbtN | 0.013 | 2.338 |
| Trans05 | 0.068 | -1.09 |
| macrophage_unactivated | 0.388 | -0.035 |
| IL1 | 0.86 | 1.207 |
| Rapamycin | 1.2 | 0.767 |
| Tcell | 1.03 | 0.342 |
| GMCSF | -0.084 | 0.539 |
| IFNab | 0.327 | -0.133 |
| IFNg | 0.329 | 0.059 |
| IFNg_GMCSF1 | 0.198 | 0.101 |
| Rv1432_day32 | 0.721 | 0.18 |
| Rv1565c_day32 | 0.305 | 0.025 |
| secA2_input | -0.504 | -0.794 |
| delta_Rv3594 | 0.919 | -0.187 |
| delta_Rv3717 | -0.263 | -0.607 |
| delta_Rv3811 | -0.81 | -0.379 |
| delta_Rv0954 | 0.102 | -0.242 |
| PonA1 | 0.126 | -0.435 |
| EccD1_KO | -0.444 | -1.727 |
| EspI_KO | -0.208 | -0.268 |
| PE35_KO | 0.283 | 0.175 |
| PPE68_KO | -0.234 | -0.909 |
| glycerol2 | -1.138 | -0.888 |
| lignocerate | -1.622 | -0.919 |
| oleate | -0.322 | -0.207 |
| phosphatidylcholine | -0.958 | -0.689 |
| acetate | -1.012 | -0.447 |
| glucAc | -0.486 | -1.339 |
| Rv0950ko | 0.09 | 0.751 |
| Rv1096ko | 0.709 | 1.3 |
| Rv3684ko | 0.77 | 0.0 |
| delta_otsA_trehalose | -2.117 | -0.267 |