Top 10 genes with highest correlation to Rv0476/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0346c/ansP2 | (cc=0.5573) | info on Rv0346c/ansP2 |
| Rv0644c/mmaA2 | (cc=0.5531) | info on Rv0644c/mmaA2 |
| Rv3821/- | (cc=0.5217) | info on Rv3821/- |
| Rv0473/- | (cc=0.4926) | info on Rv0473/- |
| Rv3487c/lipF | (cc=0.4905) | info on Rv3487c/lipF |
| Rv1861/- | (cc=0.4767) | info on Rv1861/- |
| Rv1871c/- | (cc=0.4761) | info on Rv1871c/- |
| Rv1386/PE15 | (cc=0.4739) | info on Rv1386/PE15 |
| Rv2618/- | (cc=0.4739) | info on Rv2618/- |
| Rv2184c/- | (cc=0.464) | info on Rv2184c/- |
Correlation of Rv0476/- with Rv1871c/-
Normalized LFCs for Rv0476/-:
(description and provenance of datasets)
| Rv0476/- | Rv1871c/- | |
| Fe_supp_jason_reseq | -0.401 | -0.912 |
| low_pH_jason_reseq | -0.773 | -0.53 |
| NO_jason_reseq | 0.092 | 0.473 |
| B6_jason_reseq | -1.211 | -1.258 |
| MHCII_jason_reseq | 0.065 | -1.425 |
| Isoniazid02 | 0.955 | 1.439 |
| Rifampicin4 | 0.736 | 0.479 |
| Ethambutol3 | 1.192 | 0.428 |
| Meropenem3 | 1.353 | 0.461 |
| Vancomycin16 | 0.722 | 0.456 |
| Rv2680_day32 | 1.297 | -0.682 |
| H37Rv_KO_MarP | -1.099 | -0.285 |
| hypoxia_3wks | 1.105 | 0.75 |
| hypoxia_6wks | 1.117 | 0.073 |
| glycerol | -2.055 | -0.992 |
| cholesterol | -1.374 | -0.324 |
| AJ | -0.376 | -0.239 |
| Bibs02 | -0.411 | -0.36 |
| Bibs02c | -1.184 | -1.199 |
| BL6 | -0.434 | -0.055 |
| BL6a | -0.535 | -0.277 |
| BXD01 | 0.481 | -0.095 |
| BXD010 | 0.742 | 0.395 |
| BXD011 | 0.567 | 0.603 |
| BXD03 | 0.28 | -0.029 |
| BXD04 | 0.913 | -0.269 |
| BXD05 | 0.417 | 0.71 |
| BXD06 | 0.391 | 0.057 |
| BXD07 | 0.877 | 0.007 |
| BXD08 | 0.675 | 0.157 |
| BXD09 | 0.248 | -0.145 |
| CAST | -1.175 | 0.37 |
| CCcont | 0.057 | -0.471 |
| DS01 | 0.05 | -0.039 |
| DS02 | -0.213 | -0.501 |
| DS04 | 0.624 | -0.177 |
| DS0c | -0.561 | -0.277 |
| GP01 | 0.17 | 1.05 |
| GP02 | 0.266 | 0.11 |
| GP0c | 0.633 | 0.703 |
| NOD | 0.392 | 0.485 |
| NZO | 0.5 | -0.688 |
| PWK | -0.036 | -0.604 |
| H37Rv_KO_CtpC | -0.065 | 0.112 |
| H37Rv_KO_CtpD | 0.833 | 0.495 |
| H37Rv_KO_Rv1272 | 0.087 | 0.893 |
| H37Rv_KO_SugABC | 0.658 | 0.349 |
| H37Rv_KO_MbtN | 1.183 | 1.584 |
| Trans05 | 0.228 | 0.698 |
| macrophage_unactivated | 0.312 | 0.625 |
| IL1 | -0.967 | -0.403 |
| Rapamycin | -0.184 | 0.476 |
| Tcell | -0.244 | -0.345 |
| GMCSF | 0.211 | 0.869 |
| IFNab | 0.84 | 0.686 |
| IFNg | 0.708 | -0.168 |
| IFNg_GMCSF1 | 0.06 | 0.292 |
| Rv1432_day32 | 1.622 | -0.485 |
| Rv1565c_day32 | -0.295 | -0.009 |
| secA2_input | -1.035 | -0.994 |
| delta_Rv3594 | -0.318 | -1.137 |
| delta_Rv3717 | 0.38 | -1.158 |
| delta_Rv3811 | 0.489 | -0.758 |
| delta_Rv0954 | -0.881 | -0.908 |
| PonA1 | -0.275 | -1.138 |
| EccD1_KO | -1.496 | -0.306 |
| EspI_KO | -0.299 | 0.915 |
| PE35_KO | -1.423 | -0.184 |
| PPE68_KO | -0.995 | -0.074 |
| glycerol2 | 2.023 | 0.265 |
| lignocerate | 0.267 | -0.578 |
| oleate | 2.439 | 0.698 |
| phosphatidylcholine | 0.097 | 0.37 |
| acetate | -0.04 | -0.836 |
| glucAc | -0.154 | -1.325 |
| Rv0950ko | -0.413 | -0.874 |
| Rv1096ko | -0.929 | -1.378 |
| Rv3684ko | -0.38 | -0.707 |
| delta_otsA_trehalose | -0.738 | 0.11 |