TnSeqCorr

Top 10 genes with highest correlation to Rv0476/-:

update plotcorrelationlink to info on gene
Rv0346c/ansP2 (cc=0.5573) info on Rv0346c/ansP2
Rv0644c/mmaA2 (cc=0.5531) info on Rv0644c/mmaA2
Rv3821/- (cc=0.5217) info on Rv3821/-
Rv0473/- (cc=0.4926) info on Rv0473/-
Rv3487c/lipF (cc=0.4905) info on Rv3487c/lipF
Rv1861/- (cc=0.4767) info on Rv1861/-
Rv1871c/- (cc=0.4761) info on Rv1871c/-
Rv1386/PE15 (cc=0.4739) info on Rv1386/PE15
Rv2618/- (cc=0.4739) info on Rv2618/-
Rv2184c/- (cc=0.464) info on Rv2184c/-

Correlation of Rv0476/- with Rv0346c/ansP2

Normalized LFCs for Rv0476/-:
(description and provenance of datasets)
Rv0476/-Rv0346c/ansP2
Fe_supp_jason_reseq

-0.401

-2.144

low_pH_jason_reseq

-0.773

-1.241

NO_jason_reseq

0.092

-1.045

B6_jason_reseq

-1.211

-1.311

MHCII_jason_reseq

0.065

-1.572

Isoniazid02

0.955

-1.132

Rifampicin4

0.736

1.335

Ethambutol3

1.192

1.181

Meropenem3

1.353

0.052

Vancomycin16

0.722

-0.093

Rv2680_day32

1.297

0.412

H37Rv_KO_MarP

-1.099

-0.648

hypoxia_3wks

1.105

-0.614

hypoxia_6wks

1.117

1.662

glycerol

-2.055

-5.051

cholesterol

-1.374

-4.096

AJ

-0.376

-0.45

Bibs02

-0.411

-0.146

Bibs02c

-1.184

-0.627

BL6

-0.434

-0.755

BL6a

-0.535

-0.418

BXD01

0.481

-0.141

BXD010

0.742

0.227

BXD011

0.567

0.113

BXD03

0.28

0.421

BXD04

0.913

0.37

BXD05

0.417

0.525

BXD06

0.391

0.545

BXD07

0.877

0.025

BXD08

0.675

-0.307

BXD09

0.248

-0.119

CAST

-1.175

0.195

CCcont

0.057

-0.805

DS01

0.05

-0.438

DS02

-0.213

-0.939

DS04

0.624

0.818

DS0c

-0.561

-0.677

GP01

0.17

-0.042

GP02

0.266

-0.829

GP0c

0.633

-0.486

NOD

0.392

-0.368

NZO

0.5

-0.019

PWK

-0.036

1.262

H37Rv_KO_CtpC

-0.065

-0.565

H37Rv_KO_CtpD

0.833

-0.267

H37Rv_KO_Rv1272

0.087

-0.8

H37Rv_KO_SugABC

0.658

-0.993

H37Rv_KO_MbtN

1.183

0.546

Trans05

0.228

-0.228

macrophage_unactivated

0.312

-0.221

IL1

-0.967

0.095

Rapamycin

-0.184

-0.071

Tcell

-0.244

0.951

GMCSF

0.211

0.639

IFNab

0.84

-0.541

IFNg

0.708

0.337

IFNg_GMCSF1

0.06

0.537

Rv1432_day32

1.622

1.107

Rv1565c_day32

-0.295

-1.156

secA2_input

-1.035

-0.54

delta_Rv3594

-0.318

0.809

delta_Rv3717

0.38

0.938

delta_Rv3811

0.489

0.828

delta_Rv0954

-0.881

0.061

PonA1

-0.275

0.381

EccD1_KO

-1.496

-0.187

EspI_KO

-0.299

-0.374

PE35_KO

-1.423

-1.059

PPE68_KO

-0.995

-0.723

glycerol2

2.023

1.225

lignocerate

0.267

-0.153

oleate

2.439

2.562

phosphatidylcholine

0.097

0.0

acetate

-0.04

0.369

glucAc

-0.154

0.685

Rv0950ko

-0.413

0.353

Rv1096ko

-0.929

0.437

Rv3684ko

-0.38

0.242

delta_otsA_trehalose

-0.738

0.449