Top 10 genes with highest correlation to Rv0448c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0968/- | (cc=0.5277) | info on Rv0968/- |
| Rv0265c/- | (cc=0.4785) | info on Rv0265c/- |
| Rv3058c/- | (cc=0.4747) | info on Rv3058c/- |
| Rv0266c/oplA | (cc=0.4701) | info on Rv0266c/oplA |
| Rv3295/- | (cc=0.4584) | info on Rv3295/- |
| Rv3366/spoU | (cc=0.4532) | info on Rv3366/spoU |
| Rv3641c/fic | (cc=0.4516) | info on Rv3641c/fic |
| Rv0886/fprB | (cc=0.4465) | info on Rv0886/fprB |
| Rv1144/- | (cc=0.4454) | info on Rv1144/- |
| Rv2636/- | (cc=0.4437) | info on Rv2636/- |
Correlation of Rv0448c/- with Rv0968/-
Normalized LFCs for Rv0448c/-:
(description and provenance of datasets)
| Rv0448c/- | Rv0968/- | |
| Fe_supp_jason_reseq | 0.66 | 0.704 |
| low_pH_jason_reseq | -0.572 | -0.738 |
| NO_jason_reseq | 0.032 | 0.423 |
| B6_jason_reseq | -0.13 | 0.01 |
| MHCII_jason_reseq | 0.395 | 0.27 |
| Isoniazid02 | -1.148 | -3.296 |
| Rifampicin4 | -0.736 | 0.831 |
| Ethambutol3 | -0.552 | -2.914 |
| Meropenem3 | -0.81 | -3.018 |
| Vancomycin16 | -0.615 | -1.112 |
| Rv2680_day32 | 0.066 | 0.91 |
| H37Rv_KO_MarP | 0.181 | 0.883 |
| hypoxia_3wks | 0.076 | -0.203 |
| hypoxia_6wks | -0.267 | -1.349 |
| glycerol | -0.385 | 0.677 |
| cholesterol | -0.556 | 0.845 |
| AJ | -0.346 | 0.528 |
| Bibs02 | -0.53 | -0.278 |
| Bibs02c | -0.183 | 0.671 |
| BL6 | -1.144 | -0.789 |
| BL6a | -0.639 | -0.393 |
| BXD01 | -0.847 | -0.379 |
| BXD010 | -0.371 | -0.019 |
| BXD011 | -1.046 | -0.923 |
| BXD03 | -0.477 | -0.794 |
| BXD04 | 0.063 | -0.426 |
| BXD05 | -0.424 | 0.48 |
| BXD06 | -1.019 | -0.954 |
| BXD07 | -1.011 | -0.699 |
| BXD08 | -0.25 | -0.379 |
| BXD09 | -1.003 | -0.542 |
| CAST | 0.122 | 0.265 |
| CCcont | -1.416 | -0.929 |
| DS01 | -0.344 | -0.469 |
| DS02 | -0.178 | 0.635 |
| DS04 | -0.919 | 0.093 |
| DS0c | -0.668 | -0.211 |
| GP01 | -0.207 | 0.345 |
| GP02 | -1.342 | -0.744 |
| GP0c | -0.454 | -0.329 |
| NOD | -0.218 | 0.885 |
| NZO | 0.085 | -0.27 |
| PWK | -0.06 | -0.254 |
| H37Rv_KO_CtpC | -1.125 | -0.14 |
| H37Rv_KO_CtpD | 0.988 | 1.622 |
| H37Rv_KO_Rv1272 | -0.25 | 1.062 |
| H37Rv_KO_SugABC | 0.269 | 0.86 |
| H37Rv_KO_MbtN | 0.14 | -1.047 |
| Trans05 | -1.057 | -0.921 |
| macrophage_unactivated | -0.054 | -0.843 |
| IL1 | -0.469 | -0.946 |
| Rapamycin | -0.503 | -1.105 |
| Tcell | -0.661 | -0.472 |
| GMCSF | 0.09 | -0.055 |
| IFNab | -0.925 | -0.13 |
| IFNg | -0.158 | -0.516 |
| IFNg_GMCSF1 | -0.874 | -0.569 |
| Rv1432_day32 | -0.827 | -0.215 |
| Rv1565c_day32 | 0.387 | 0.445 |
| secA2_input | 0.679 | 1.842 |
| delta_Rv3594 | -0.866 | 0.096 |
| delta_Rv3717 | -0.642 | -0.593 |
| delta_Rv3811 | -0.601 | -0.167 |
| delta_Rv0954 | -0.386 | -0.105 |
| PonA1 | -0.298 | 1.324 |
| EccD1_KO | -0.059 | 1.237 |
| EspI_KO | -0.704 | -0.074 |
| PE35_KO | -0.639 | 0.111 |
| PPE68_KO | -0.682 | -0.192 |
| glycerol2 | 0.447 | 0.146 |
| lignocerate | 0.071 | 0.072 |
| oleate | 0.414 | 0.18 |
| phosphatidylcholine | 0.167 | 0.326 |
| acetate | 0.115 | 0.352 |
| glucAc | -0.613 | 0.061 |
| Rv0950ko | 0.651 | 0.458 |
| Rv1096ko | 0.724 | 1.2 |
| Rv3684ko | 0.377 | 0.652 |
| delta_otsA_trehalose | -0.6 | 1.843 |