TnSeqCorr

Top 10 genes with highest correlation to Rv0442c/PPE10:

update plotcorrelationlink to info on gene
Rv1882c/- (cc=0.5862) info on Rv1882c/-
Rv2240c/- (cc=0.5727) info on Rv2240c/-
Rv2851c/- (cc=0.5562) info on Rv2851c/-
Rv3506/fadD17 (cc=0.5525) info on Rv3506/fadD17
Rv3468c/- (cc=0.5465) info on Rv3468c/-
Rv2007c/fdxA (cc=0.5354) info on Rv2007c/fdxA
Rv1186c/- (cc=0.5046) info on Rv1186c/-
Rv1045/- (cc=0.4965) info on Rv1045/-
Rv1442/bisC (cc=0.4914) info on Rv1442/bisC
Rv1999c/- (cc=0.491) info on Rv1999c/-

Correlation of Rv0442c/PPE10 with Rv1882c/-

Normalized LFCs for Rv0442c/PPE10:
(description and provenance of datasets)
Rv0442c/PPE10Rv1882c/-
Fe_supp_jason_reseq

-0.26

1.157

low_pH_jason_reseq

-0.221

-0.606

NO_jason_reseq

0.228

-0.029

B6_jason_reseq

-0.059

0.272

MHCII_jason_reseq

-0.082

0.707

Isoniazid02

0.109

0.179

Rifampicin4

-0.089

-0.845

Ethambutol3

0.0

0.218

Meropenem3

0.127

0.199

Vancomycin16

-0.029

-0.141

Rv2680_day32

0.028

-0.219

H37Rv_KO_MarP

0.285

0.676

hypoxia_3wks

-0.654

-0.247

hypoxia_6wks

-0.038

-0.255

glycerol

-0.518

-0.238

cholesterol

-0.426

0.063

AJ

0.121

0.259

Bibs02

-0.469

0.204

Bibs02c

-0.082

-0.082

BL6

-0.557

-0.31

BL6a

-0.298

-0.606

BXD01

-0.367

-0.493

BXD010

-0.524

-0.628

BXD011

-0.383

-0.311

BXD03

-0.879

-0.446

BXD04

-0.667

-0.55

BXD05

-0.413

-0.465

BXD06

-0.318

-0.015

BXD07

-0.313

-0.338

BXD08

0.158

-0.46

BXD09

-0.343

-0.696

CAST

-0.21

-0.205

CCcont

-0.393

-0.393

DS01

-0.395

0.055

DS02

0.395

-0.228

DS04

-0.028

-0.076

DS0c

-0.413

-0.165

GP01

0.024

0.151

GP02

1.034

0.244

GP0c

-0.278

-0.549

NOD

0.286

0.556

NZO

-0.289

0.325

PWK

-0.21

-0.149

H37Rv_KO_CtpC

-0.499

0.202

H37Rv_KO_CtpD

-0.397

-0.863

H37Rv_KO_Rv1272

0.093

0.366

H37Rv_KO_SugABC

0.723

0.006

H37Rv_KO_MbtN

-0.35

0.64

Trans05

-0.849

-0.281

macrophage_unactivated

-0.085

-0.051

IL1

0.053

0.273

Rapamycin

0.135

0.129

Tcell

-0.209

0.283

GMCSF

0.383

0.283

IFNab

-0.281

-0.063

IFNg

0.321

0.056

IFNg_GMCSF1

0.776

0.804

Rv1432_day32

0.31

0.546

Rv1565c_day32

-0.03

0.1

secA2_input

-0.462

-0.365

delta_Rv3594

-0.04

-0.207

delta_Rv3717

-0.054

-0.042

delta_Rv3811

-0.69

-0.581

delta_Rv0954

-0.554

-0.412

PonA1

-0.576

-0.294

EccD1_KO

-0.312

-0.145

EspI_KO

0.228

-0.391

PE35_KO

-0.277

-0.977

PPE68_KO

-0.179

-0.95

glycerol2

0.345

0.923

lignocerate

0.928

0.94

oleate

-0.421

0.176

phosphatidylcholine

0.536

0.951

acetate

0.618

0.397

glucAc

0.624

0.288

Rv0950ko

0.389

0.57

Rv1096ko

0.296

0.461

Rv3684ko

0.622

-0.449

delta_otsA_trehalose

1.603

1.436