Top 10 genes with highest correlation to Rv0364/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0588/yrbE2B | (cc=0.575) | info on Rv0588/yrbE2B |
| Rv2678c/hemE | (cc=0.5404) | info on Rv2678c/hemE |
| Rv3024c/trmU | (cc=0.5256) | info on Rv3024c/trmU |
| Rv3025c/iscS | (cc=0.5148) | info on Rv3025c/iscS |
| Rv2373c/dnaJ2 | (cc=0.5031) | info on Rv2373c/dnaJ2 |
| Rv3692/moxR2 | (cc=0.4912) | info on Rv3692/moxR2 |
| Rv3489/- | (cc=0.4907) | info on Rv3489/- |
| Rv0637/hadC | (cc=0.4773) | info on Rv0637/hadC |
| Rv3670/ephE | (cc=0.4707) | info on Rv3670/ephE |
| Rv0734/mapA | (cc=0.4687) | info on Rv0734/mapA |
Correlation of Rv0364/- with Rv0588/yrbE2B
Normalized LFCs for Rv0364/-:
(description and provenance of datasets)
| Rv0364/- | Rv0588/yrbE2B | |
| Fe_supp_jason_reseq | 0.227 | -0.254 |
| low_pH_jason_reseq | 0.124 | -0.761 |
| NO_jason_reseq | 0.557 | -0.137 |
| B6_jason_reseq | -0.736 | -0.85 |
| MHCII_jason_reseq | -0.905 | -0.215 |
| Isoniazid02 | -0.097 | -1.806 |
| Rifampicin4 | -0.374 | -0.127 |
| Ethambutol3 | -0.793 | -1.677 |
| Meropenem3 | -0.165 | -1.681 |
| Vancomycin16 | -0.562 | -0.639 |
| Rv2680_day32 | 2.062 | 1.112 |
| H37Rv_KO_MarP | -0.906 | 0.102 |
| hypoxia_3wks | -0.427 | -0.399 |
| hypoxia_6wks | 0.106 | -0.209 |
| glycerol | -0.136 | -0.645 |
| cholesterol | 0.0 | -0.574 |
| AJ | 0.146 | 0.822 |
| Bibs02 | 0.927 | 0.894 |
| Bibs02c | -1.028 | -0.617 |
| BL6 | 0.53 | 0.894 |
| BL6a | 0.562 | 0.512 |
| BXD01 | 0.856 | 0.738 |
| BXD010 | -0.278 | 0.843 |
| BXD011 | 1.463 | 1.88 |
| BXD03 | 0.84 | -0.272 |
| BXD04 | 0.288 | 1.036 |
| BXD05 | 1.018 | 0.348 |
| BXD06 | 1.411 | 1.015 |
| BXD07 | 0.861 | 0.595 |
| BXD08 | 0.963 | 0.753 |
| BXD09 | 1.417 | 0.81 |
| CAST | -0.155 | 0.202 |
| CCcont | 1.35 | 0.73 |
| DS01 | -0.159 | -0.755 |
| DS02 | 1.966 | -0.748 |
| DS04 | -0.583 | 0.07 |
| DS0c | -0.85 | -0.165 |
| GP01 | 0.777 | 0.882 |
| GP02 | -0.25 | -0.047 |
| GP0c | 0.369 | 0.24 |
| NOD | 1.699 | -0.042 |
| NZO | -0.134 | 0.306 |
| PWK | 0.915 | -0.578 |
| H37Rv_KO_CtpC | 0.379 | 0.348 |
| H37Rv_KO_CtpD | -0.496 | 1.415 |
| H37Rv_KO_Rv1272 | 0.4 | 1.169 |
| H37Rv_KO_SugABC | -0.298 | 0.45 |
| H37Rv_KO_MbtN | 0.959 | -0.656 |
| Trans05 | 0.371 | 0.093 |
| macrophage_unactivated | 0.164 | -0.057 |
| IL1 | -0.329 | 0.05 |
| Rapamycin | 0.316 | -0.055 |
| Tcell | 1.352 | 0.541 |
| GMCSF | -0.779 | 0.396 |
| IFNab | 0.311 | 0.051 |
| IFNg | -0.617 | 0.315 |
| IFNg_GMCSF1 | 2.316 | -0.654 |
| Rv1432_day32 | 0.0 | 0.169 |
| Rv1565c_day32 | 0.0 | 0.621 |
| secA2_input | 0.283 | 0.25 |
| delta_Rv3594 | 0.353 | 0.132 |
| delta_Rv3717 | 1.446 | 0.541 |
| delta_Rv3811 | 1.947 | 0.913 |
| delta_Rv0954 | 0.886 | 0.842 |
| PonA1 | -0.95 | 0.546 |
| EccD1_KO | -1.441 | -0.635 |
| EspI_KO | -1.383 | -0.927 |
| PE35_KO | -2.354 | -2.042 |
| PPE68_KO | -3.424 | -1.699 |
| glycerol2 | -0.321 | -0.029 |
| lignocerate | -0.341 | 0.421 |
| oleate | -1.191 | 0.274 |
| phosphatidylcholine | -0.88 | 0.112 |
| acetate | -0.221 | 0.0 |
| glucAc | 0.451 | 0.042 |
| Rv0950ko | 1.668 | 1.984 |
| Rv1096ko | 2.714 | 2.844 |
| Rv3684ko | 2.021 | 1.503 |
| delta_otsA_trehalose | -0.861 | -0.55 |