Top 10 genes with highest correlation to Rv0300/vapB2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1976c/- | (cc=0.4675) | info on Rv1976c/- |
| Rv0633c/- | (cc=0.4561) | info on Rv0633c/- |
| Rv0435c/- | (cc=0.4317) | info on Rv0435c/- |
| Rv0778/cyp126 | (cc=0.4231) | info on Rv0778/cyp126 |
| Rv1358/- | (cc=0.4093) | info on Rv1358/- |
| Rv0936/pstA2 | (cc=0.4087) | info on Rv0936/pstA2 |
| Rv2320c/rocE | (cc=0.4081) | info on Rv2320c/rocE |
| Rv1541c/lprI | (cc=0.3939) | info on Rv1541c/lprI |
| Rv0388c/PPE9 | (cc=0.3873) | info on Rv0388c/PPE9 |
| Rv1363c/- | (cc=0.3835) | info on Rv1363c/- |
Correlation of Rv0300/vapB2 with Rv0435c/-
Normalized LFCs for Rv0300/vapB2:
(description and provenance of datasets)
| Rv0300/vapB2 | Rv0435c/- | |
| Fe_supp_jason_reseq | 0.464 | -0.83 |
| low_pH_jason_reseq | -0.924 | -0.957 |
| NO_jason_reseq | -0.305 | 0.21 |
| B6_jason_reseq | 0.449 | 0.495 |
| MHCII_jason_reseq | 0.094 | 0.761 |
| Isoniazid02 | -0.214 | 0.403 |
| Rifampicin4 | -0.16 | 0.0 |
| Ethambutol3 | 0.029 | -0.202 |
| Meropenem3 | 0.422 | 1.136 |
| Vancomycin16 | -0.098 | 0.462 |
| Rv2680_day32 | -0.998 | -0.621 |
| H37Rv_KO_MarP | -0.378 | 0.83 |
| hypoxia_3wks | -0.682 | -0.271 |
| hypoxia_6wks | -0.551 | 0.441 |
| glycerol | 0.553 | 0.487 |
| cholesterol | 0.867 | 0.019 |
| AJ | 0.44 | 0.455 |
| Bibs02 | 0.327 | 0.262 |
| Bibs02c | 0.026 | 0.061 |
| BL6 | -1.319 | -0.85 |
| BL6a | 0.504 | -0.766 |
| BXD01 | -0.518 | -0.902 |
| BXD010 | -0.679 | -0.442 |
| BXD011 | -0.288 | -0.499 |
| BXD03 | -0.188 | -1.209 |
| BXD04 | -0.183 | -0.34 |
| BXD05 | 0.488 | -0.689 |
| BXD06 | -0.314 | -0.677 |
| BXD07 | 0.379 | -0.785 |
| BXD08 | -0.321 | -0.937 |
| BXD09 | -0.228 | -0.766 |
| CAST | 0.904 | -0.195 |
| CCcont | -0.731 | -1.324 |
| DS01 | 0.053 | 0.305 |
| DS02 | 0.884 | 0.014 |
| DS04 | -1.216 | 0.129 |
| DS0c | 0.107 | 0.171 |
| GP01 | -0.693 | -0.875 |
| GP02 | -1.436 | -0.472 |
| GP0c | -0.722 | -0.782 |
| NOD | 0.477 | -0.264 |
| NZO | 0.168 | -0.013 |
| PWK | 0.219 | -0.058 |
| H37Rv_KO_CtpC | 0.0 | -1.134 |
| H37Rv_KO_CtpD | 0.2 | -0.139 |
| H37Rv_KO_Rv1272 | -0.461 | -1.317 |
| H37Rv_KO_SugABC | 0.119 | -0.203 |
| H37Rv_KO_MbtN | -0.46 | -1.563 |
| Trans05 | -0.193 | -1.139 |
| macrophage_unactivated | -0.609 | -0.461 |
| IL1 | 0.451 | 0.086 |
| Rapamycin | 0.479 | -0.424 |
| Tcell | 0.424 | -0.244 |
| GMCSF | 0.227 | 0.224 |
| IFNab | 0.599 | -0.877 |
| IFNg | 0.51 | -0.118 |
| IFNg_GMCSF1 | 0.386 | 0.374 |
| Rv1432_day32 | -0.645 | -0.086 |
| Rv1565c_day32 | 1.42 | 0.78 |
| secA2_input | -0.908 | 0.016 |
| delta_Rv3594 | -0.434 | -1.08 |
| delta_Rv3717 | -0.888 | -0.56 |
| delta_Rv3811 | 0.813 | -0.739 |
| delta_Rv0954 | 0.703 | -0.386 |
| PonA1 | 0.935 | -0.159 |
| EccD1_KO | 0.559 | 0.178 |
| EspI_KO | -0.194 | -0.328 |
| PE35_KO | 0.032 | -0.648 |
| PPE68_KO | -0.278 | -0.509 |
| glycerol2 | -0.189 | -0.967 |
| lignocerate | -0.231 | -0.647 |
| oleate | -0.204 | -1.133 |
| phosphatidylcholine | -0.59 | -0.73 |
| acetate | -1.014 | -1.237 |
| glucAc | -0.841 | -0.567 |
| Rv0950ko | 0.778 | 0.199 |
| Rv1096ko | 0.483 | 0.89 |
| Rv3684ko | -0.183 | 0.478 |
| delta_otsA_trehalose | -1.349 | -2.069 |