Top 10 genes with highest correlation to Rv0300/vapB2:
update plot | correlation | link to info on gene |
---|---|---|
Rv1976c/- | (cc=0.4675) | info on Rv1976c/- |
Rv0633c/- | (cc=0.4561) | info on Rv0633c/- |
Rv0435c/- | (cc=0.4317) | info on Rv0435c/- |
Rv0778/cyp126 | (cc=0.4231) | info on Rv0778/cyp126 |
Rv1358/- | (cc=0.4093) | info on Rv1358/- |
Rv0936/pstA2 | (cc=0.4087) | info on Rv0936/pstA2 |
Rv2320c/rocE | (cc=0.4081) | info on Rv2320c/rocE |
Rv1541c/lprI | (cc=0.3939) | info on Rv1541c/lprI |
Rv0388c/PPE9 | (cc=0.3873) | info on Rv0388c/PPE9 |
Rv1363c/- | (cc=0.3835) | info on Rv1363c/- |
Correlation of Rv0300/vapB2 with Rv1976c/-
Normalized LFCs for Rv0300/vapB2:
(description and provenance of datasets)
Rv0300/vapB2 | Rv1976c/- | |
Fe_supp_jason_reseq | 0.464 | 0.696 |
low_pH_jason_reseq | -0.924 | 1.633 |
NO_jason_reseq | -0.305 | -0.564 |
B6_jason_reseq | 0.449 | 0.857 |
MHCII_jason_reseq | 0.094 | 1.33 |
Isoniazid02 | -0.214 | -0.138 |
Rifampicin4 | -0.16 | -1.148 |
Ethambutol3 | 0.029 | -0.413 |
Meropenem3 | 0.422 | 0.086 |
Vancomycin16 | -0.098 | -0.411 |
Rv2680_day32 | -0.998 | -2.312 |
H37Rv_KO_MarP | -0.378 | 0.814 |
hypoxia_3wks | -0.682 | -0.411 |
hypoxia_6wks | -0.551 | -0.497 |
glycerol | 0.553 | -0.24 |
cholesterol | 0.867 | 0.392 |
AJ | 0.44 | 1.676 |
Bibs02 | 0.327 | 0.947 |
Bibs02c | 0.026 | 0.67 |
BL6 | -1.319 | 0.186 |
BL6a | 0.504 | 0.779 |
BXD01 | -0.518 | -1.329 |
BXD010 | -0.679 | -0.049 |
BXD011 | -0.288 | -0.459 |
BXD03 | -0.188 | -0.351 |
BXD04 | -0.183 | -0.328 |
BXD05 | 0.488 | -0.168 |
BXD06 | -0.314 | -0.223 |
BXD07 | 0.379 | 0.559 |
BXD08 | -0.321 | -0.861 |
BXD09 | -0.228 | 0.324 |
CAST | 0.904 | 0.649 |
CCcont | -0.731 | -0.116 |
DS01 | 0.053 | 1.61 |
DS02 | 0.884 | 1.224 |
DS04 | -1.216 | -0.944 |
DS0c | 0.107 | 0.627 |
GP01 | -0.693 | -1.305 |
GP02 | -1.436 | -2.7 |
GP0c | -0.722 | -1.427 |
NOD | 0.477 | 0.239 |
NZO | 0.168 | -0.705 |
PWK | 0.219 | -0.055 |
H37Rv_KO_CtpC | 0.0 | -0.211 |
H37Rv_KO_CtpD | 0.2 | 1.572 |
H37Rv_KO_Rv1272 | -0.461 | 1.429 |
H37Rv_KO_SugABC | 0.119 | -1.412 |
H37Rv_KO_MbtN | -0.46 | -1.964 |
Trans05 | -0.193 | 0.306 |
macrophage_unactivated | -0.609 | 0.735 |
IL1 | 0.451 | 0.569 |
Rapamycin | 0.479 | 0.516 |
Tcell | 0.424 | 0.587 |
GMCSF | 0.227 | 0.428 |
IFNab | 0.599 | -0.127 |
IFNg | 0.51 | 0.414 |
IFNg_GMCSF1 | 0.386 | -0.044 |
Rv1432_day32 | -0.645 | -1.516 |
Rv1565c_day32 | 1.42 | 1.387 |
secA2_input | -0.908 | 0.269 |
delta_Rv3594 | -0.434 | 2.527 |
delta_Rv3717 | -0.888 | 2.834 |
delta_Rv3811 | 0.813 | 1.417 |
delta_Rv0954 | 0.703 | 2.398 |
PonA1 | 0.935 | 3.281 |
EccD1_KO | 0.559 | 0.454 |
EspI_KO | -0.194 | -1.298 |
PE35_KO | 0.032 | -0.583 |
PPE68_KO | -0.278 | -0.704 |
glycerol2 | -0.189 | 1.065 |
lignocerate | -0.231 | 0.11 |
oleate | -0.204 | 0.278 |
phosphatidylcholine | -0.59 | 0.564 |
acetate | -1.014 | 0.535 |
glucAc | -0.841 | 0.488 |
Rv0950ko | 0.778 | 1.737 |
Rv1096ko | 0.483 | 1.2 |
Rv3684ko | -0.183 | 0.265 |
delta_otsA_trehalose | -1.349 | -2.64 |