Top 10 genes with highest correlation to Rv0296c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3160c/- | (cc=0.7055) | info on Rv3160c/- |
| Rv0249c/- | (cc=0.657) | info on Rv0249c/- |
| Rv2605c/tesB2 | (cc=0.6541) | info on Rv2605c/tesB2 |
| Rv0712/- | (cc=0.6441) | info on Rv0712/- |
| Rv0485/- | (cc=0.6351) | info on Rv0485/- |
| Rv1193/fadD36 | (cc=0.626) | info on Rv1193/fadD36 |
| Rv3197/- | (cc=0.6229) | info on Rv3197/- |
| Rv2989/- | (cc=0.6206) | info on Rv2989/- |
| Rv1314c/- | (cc=0.6105) | info on Rv1314c/- |
| Rv3400/- | (cc=0.606) | info on Rv3400/- |
Correlation of Rv0296c/- with Rv3160c/-
Normalized LFCs for Rv0296c/-:
(description and provenance of datasets)
| Rv0296c/- | Rv3160c/- | |
| Fe_supp_jason_reseq | 0.589 | 0.881 |
| low_pH_jason_reseq | -1.272 | -3.092 |
| NO_jason_reseq | -3.127 | -4.489 |
| B6_jason_reseq | -1.253 | -2.051 |
| MHCII_jason_reseq | -0.655 | -1.806 |
| Isoniazid02 | -0.774 | -1.491 |
| Rifampicin4 | 0.024 | 2.708 |
| Ethambutol3 | 0.704 | 3.085 |
| Meropenem3 | 0.448 | 0.308 |
| Vancomycin16 | -0.244 | -0.268 |
| Rv2680_day32 | -1.512 | -2.089 |
| H37Rv_KO_MarP | 0.625 | -1.269 |
| hypoxia_3wks | -1.128 | -3.381 |
| hypoxia_6wks | -1.639 | -3.571 |
| glycerol | -0.777 | -1.712 |
| cholesterol | -1.049 | -0.967 |
| AJ | -1.681 | -1.966 |
| Bibs02 | -1.35 | -2.265 |
| Bibs02c | -0.724 | -1.076 |
| BL6 | -0.634 | -1.144 |
| BL6a | -1.185 | -1.956 |
| BXD01 | -1.922 | -1.613 |
| BXD010 | -0.517 | -1.471 |
| BXD011 | -0.688 | -0.998 |
| BXD03 | -0.313 | -1.81 |
| BXD04 | -0.863 | -0.969 |
| BXD05 | -0.682 | -0.975 |
| BXD06 | -1.06 | -0.752 |
| BXD07 | -1.118 | -1.715 |
| BXD08 | -1.095 | -1.415 |
| BXD09 | -1.559 | -0.939 |
| CAST | -1.433 | -2.107 |
| CCcont | 0.396 | 1.685 |
| DS01 | -1.304 | -1.851 |
| DS02 | -1.407 | -2.911 |
| DS04 | -0.6 | -1.405 |
| DS0c | -0.875 | -1.985 |
| GP01 | -0.579 | -1.322 |
| GP02 | -0.846 | -1.031 |
| GP0c | -0.674 | -1.741 |
| NOD | -1.067 | -0.675 |
| NZO | -2.373 | -2.67 |
| PWK | -1.614 | -2.626 |
| H37Rv_KO_CtpC | -0.721 | -0.76 |
| H37Rv_KO_CtpD | 0.619 | 1.353 |
| H37Rv_KO_Rv1272 | -0.778 | -0.319 |
| H37Rv_KO_SugABC | 0.533 | -0.84 |
| H37Rv_KO_MbtN | -0.894 | 1.424 |
| Trans05 | -0.982 | -1.024 |
| macrophage_unactivated | 0.117 | -0.505 |
| IL1 | -0.065 | -0.113 |
| Rapamycin | -0.479 | 0.227 |
| Tcell | 0.072 | 3.135 |
| GMCSF | -0.283 | -2.445 |
| IFNab | -0.181 | -2.382 |
| IFNg | 0.174 | -1.042 |
| IFNg_GMCSF1 | -0.544 | -1.898 |
| Rv1432_day32 | -1.216 | -2.331 |
| Rv1565c_day32 | -1.237 | -2.443 |
| secA2_input | 0.365 | -0.504 |
| delta_Rv3594 | -0.835 | 0.08 |
| delta_Rv3717 | -0.858 | -0.137 |
| delta_Rv3811 | -0.385 | -0.528 |
| delta_Rv0954 | 0.432 | 0.744 |
| PonA1 | 0.698 | -0.572 |
| EccD1_KO | 0.135 | 1.46 |
| EspI_KO | -0.04 | 1.3 |
| PE35_KO | -0.298 | 0.592 |
| PPE68_KO | 0.131 | 0.787 |
| glycerol2 | 0.553 | 2.413 |
| lignocerate | 0.241 | 0.0 |
| oleate | 0.191 | 0.0 |
| phosphatidylcholine | 0.168 | 0.0 |
| acetate | -0.427 | 0.437 |
| glucAc | -0.1 | 1.481 |
| Rv0950ko | -0.169 | 0.802 |
| Rv1096ko | -0.6 | -1.182 |
| Rv3684ko | -0.278 | -0.662 |
| delta_otsA_trehalose | -0.061 | 3.118 |