Top 10 genes with highest correlation to Rv0274/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2840c/- | (cc=0.4477) | info on Rv2840c/- |
| Rv3407/vapB47 | (cc=0.4222) | info on Rv3407/vapB47 |
| Rv1582c/- | (cc=0.4137) | info on Rv1582c/- |
| Rv0897c/- | (cc=0.4111) | info on Rv0897c/- |
| Rv0557/mgtA | (cc=0.4018) | info on Rv0557/mgtA |
| Rv2571c/- | (cc=0.3995) | info on Rv2571c/- |
| Rv3026c/- | (cc=0.3969) | info on Rv3026c/- |
| Rv1067c/PE_PGRS19 | (cc=0.3918) | info on Rv1067c/PE_PGRS19 |
| Rv1194c/- | (cc=0.3885) | info on Rv1194c/- |
| Rv2825c/- | (cc=0.3871) | info on Rv2825c/- |
Correlation of Rv0274/- with Rv2571c/-
Normalized LFCs for Rv0274/-:
(description and provenance of datasets)
| Rv0274/- | Rv2571c/- | |
| Fe_supp_jason_reseq | -0.335 | -1.208 |
| low_pH_jason_reseq | -0.475 | -0.967 |
| NO_jason_reseq | -1.158 | -5.901 |
| B6_jason_reseq | -1.307 | -1.314 |
| MHCII_jason_reseq | 0.341 | -0.468 |
| Isoniazid02 | -0.295 | 1.443 |
| Rifampicin4 | 0.032 | -0.311 |
| Ethambutol3 | -0.119 | 2.297 |
| Meropenem3 | -0.178 | 0.576 |
| Vancomycin16 | 0.093 | 0.164 |
| Rv2680_day32 | -1.744 | -0.501 |
| H37Rv_KO_MarP | 0.286 | 0.854 |
| hypoxia_3wks | -0.351 | 0.419 |
| hypoxia_6wks | -0.129 | -0.155 |
| glycerol | 0.856 | 0.736 |
| cholesterol | 0.537 | 0.653 |
| AJ | 0.664 | -0.541 |
| Bibs02 | 0.799 | 0.416 |
| Bibs02c | -0.602 | 0.092 |
| BL6 | 0.594 | -0.157 |
| BL6a | -0.287 | -0.188 |
| BXD01 | -0.326 | -0.275 |
| BXD010 | 0.394 | 0.984 |
| BXD011 | 0.012 | -0.121 |
| BXD03 | -1.335 | 0.385 |
| BXD04 | 0.835 | 0.669 |
| BXD05 | 0.663 | 0.083 |
| BXD06 | 0.495 | 0.264 |
| BXD07 | -0.33 | 0.061 |
| BXD08 | 0.52 | 0.726 |
| BXD09 | 0.066 | -0.266 |
| CAST | 0.087 | 0.422 |
| CCcont | 0.056 | 0.425 |
| DS01 | 0.322 | 0.166 |
| DS02 | 0.963 | 0.447 |
| DS04 | 0.921 | 0.34 |
| DS0c | 0.729 | 0.413 |
| GP01 | -0.926 | -0.604 |
| GP02 | 0.871 | 0.52 |
| GP0c | 1.096 | 1.039 |
| NOD | 0.488 | -0.524 |
| NZO | 0.058 | -1.322 |
| PWK | -0.374 | -0.693 |
| H37Rv_KO_CtpC | 0.404 | -0.204 |
| H37Rv_KO_CtpD | -0.846 | 0.0 |
| H37Rv_KO_Rv1272 | -0.499 | -0.134 |
| H37Rv_KO_SugABC | 1.054 | -0.376 |
| H37Rv_KO_MbtN | -0.727 | -0.566 |
| Trans05 | -0.672 | -0.822 |
| macrophage_unactivated | 0.211 | -2.948 |
| IL1 | -0.94 | -4.23 |
| Rapamycin | -1.126 | -5.745 |
| Tcell | -1.033 | -4.161 |
| GMCSF | 0.486 | 0.779 |
| IFNab | -0.85 | 0.701 |
| IFNg | -1.048 | -1.109 |
| IFNg_GMCSF1 | 0.0 | -2.69 |
| Rv1432_day32 | -0.591 | -1.491 |
| Rv1565c_day32 | -0.242 | -0.731 |
| secA2_input | 0.028 | 1.021 |
| delta_Rv3594 | -1.123 | 0.635 |
| delta_Rv3717 | -1.169 | -0.25 |
| delta_Rv3811 | -0.436 | 0.702 |
| delta_Rv0954 | -0.592 | 1.221 |
| PonA1 | -0.225 | 1.091 |
| EccD1_KO | -0.24 | -0.243 |
| EspI_KO | 0.165 | -0.75 |
| PE35_KO | 0.674 | -1.403 |
| PPE68_KO | 1.43 | -1.43 |
| glycerol2 | -0.411 | -0.646 |
| lignocerate | -0.469 | -0.933 |
| oleate | -0.19 | -0.062 |
| phosphatidylcholine | -0.59 | -0.48 |
| acetate | -0.396 | -1.481 |
| glucAc | -0.856 | -1.544 |
| Rv0950ko | 0.703 | 1.239 |
| Rv1096ko | 0.784 | 3.103 |
| Rv3684ko | 0.793 | 1.723 |
| delta_otsA_trehalose | -0.751 | 0.355 |