Top 10 genes with highest correlation to Rv0274/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2840c/- | (cc=0.4477) | info on Rv2840c/- |
| Rv3407/vapB47 | (cc=0.4222) | info on Rv3407/vapB47 |
| Rv1582c/- | (cc=0.4137) | info on Rv1582c/- |
| Rv0897c/- | (cc=0.4111) | info on Rv0897c/- |
| Rv0557/mgtA | (cc=0.4018) | info on Rv0557/mgtA |
| Rv2571c/- | (cc=0.3995) | info on Rv2571c/- |
| Rv3026c/- | (cc=0.3969) | info on Rv3026c/- |
| Rv1067c/PE_PGRS19 | (cc=0.3918) | info on Rv1067c/PE_PGRS19 |
| Rv1194c/- | (cc=0.3885) | info on Rv1194c/- |
| Rv2825c/- | (cc=0.3871) | info on Rv2825c/- |
Correlation of Rv0274/- with Rv2840c/-
Normalized LFCs for Rv0274/-:
(description and provenance of datasets)
| Rv0274/- | Rv2840c/- | |
| Fe_supp_jason_reseq | -0.335 | -2.69 |
| low_pH_jason_reseq | -0.475 | 1.961 |
| NO_jason_reseq | -1.158 | 0.375 |
| B6_jason_reseq | -1.307 | -1.117 |
| MHCII_jason_reseq | 0.341 | -1.172 |
| Isoniazid02 | -0.295 | 1.596 |
| Rifampicin4 | 0.032 | -0.393 |
| Ethambutol3 | -0.119 | 0.726 |
| Meropenem3 | -0.178 | -0.386 |
| Vancomycin16 | 0.093 | 0.289 |
| Rv2680_day32 | -1.744 | -2.416 |
| H37Rv_KO_MarP | 0.286 | 0.275 |
| hypoxia_3wks | -0.351 | -1.172 |
| hypoxia_6wks | -0.129 | -0.687 |
| glycerol | 0.856 | 1.091 |
| cholesterol | 0.537 | 0.233 |
| AJ | 0.664 | -1.308 |
| Bibs02 | 0.799 | 0.346 |
| Bibs02c | -0.602 | 1.616 |
| BL6 | 0.594 | 1.96 |
| BL6a | -0.287 | 1.402 |
| BXD01 | -0.326 | 2.453 |
| BXD010 | 0.394 | -0.028 |
| BXD011 | 0.012 | 0.493 |
| BXD03 | -1.335 | 0.043 |
| BXD04 | 0.835 | 1.941 |
| BXD05 | 0.663 | 0.191 |
| BXD06 | 0.495 | 1.974 |
| BXD07 | -0.33 | 1.995 |
| BXD08 | 0.52 | 1.868 |
| BXD09 | 0.066 | 1.056 |
| CAST | 0.087 | 0.327 |
| CCcont | 0.056 | 0.91 |
| DS01 | 0.322 | 1.685 |
| DS02 | 0.963 | 1.391 |
| DS04 | 0.921 | 1.672 |
| DS0c | 0.729 | 0.951 |
| GP01 | -0.926 | 0.112 |
| GP02 | 0.871 | 0.335 |
| GP0c | 1.096 | 0.624 |
| NOD | 0.488 | 1.11 |
| NZO | 0.058 | -0.182 |
| PWK | -0.374 | -0.737 |
| H37Rv_KO_CtpC | 0.404 | 0.035 |
| H37Rv_KO_CtpD | -0.846 | -0.418 |
| H37Rv_KO_Rv1272 | -0.499 | 0.132 |
| H37Rv_KO_SugABC | 1.054 | 0.701 |
| H37Rv_KO_MbtN | -0.727 | 1.21 |
| Trans05 | -0.672 | -0.284 |
| macrophage_unactivated | 0.211 | 0.107 |
| IL1 | -0.94 | -0.828 |
| Rapamycin | -1.126 | -1.706 |
| Tcell | -1.033 | 0.326 |
| GMCSF | 0.486 | 0.43 |
| IFNab | -0.85 | -0.801 |
| IFNg | -1.048 | -0.39 |
| IFNg_GMCSF1 | 0.0 | 0.248 |
| Rv1432_day32 | -0.591 | -0.477 |
| Rv1565c_day32 | -0.242 | -0.741 |
| secA2_input | 0.028 | 0.545 |
| delta_Rv3594 | -1.123 | -1.704 |
| delta_Rv3717 | -1.169 | -1.742 |
| delta_Rv3811 | -0.436 | -2.412 |
| delta_Rv0954 | -0.592 | -1.889 |
| PonA1 | -0.225 | -2.125 |
| EccD1_KO | -0.24 | 1.977 |
| EspI_KO | 0.165 | 1.771 |
| PE35_KO | 0.674 | 1.336 |
| PPE68_KO | 1.43 | 2.339 |
| glycerol2 | -0.411 | -1.129 |
| lignocerate | -0.469 | -0.24 |
| oleate | -0.19 | -0.797 |
| phosphatidylcholine | -0.59 | -1.368 |
| acetate | -0.396 | -0.191 |
| glucAc | -0.856 | -0.453 |
| Rv0950ko | 0.703 | -0.112 |
| Rv1096ko | 0.784 | -1.04 |
| Rv3684ko | 0.793 | -0.305 |
| delta_otsA_trehalose | -0.751 | 0.887 |