TnSeqCorr

Top 10 genes with highest correlation to Rv0242c/fabG4:

update plotcorrelationlink to info on gene
Rv0243/fadA2 (cc=0.7226) info on Rv0243/fadA2
Rv2989/- (cc=0.5851) info on Rv2989/-
Rv2475c/- (cc=0.5626) info on Rv2475c/-
Rv0634A/- (cc=0.5555) info on Rv0634A/-
Rv2476c/gdh (cc=0.5413) info on Rv2476c/gdh
Rv0296c/- (cc=0.5337) info on Rv0296c/-
Rv1348/irtA (cc=0.5297) info on Rv1348/irtA
Rv0241c/htdX (cc=0.5112) info on Rv0241c/htdX
Rv0247c/- (cc=0.5097) info on Rv0247c/-
Rv3140/fadE23 (cc=0.5015) info on Rv3140/fadE23

Correlation of Rv0242c/fabG4 with Rv3140/fadE23

Normalized LFCs for Rv0242c/fabG4:
(description and provenance of datasets)
Rv0242c/fabG4Rv3140/fadE23
Fe_supp_jason_reseq

2.04

-0.025

low_pH_jason_reseq

-1.591

-0.902

NO_jason_reseq

-2.759

-1.131

B6_jason_reseq

-1.413

-1.759

MHCII_jason_reseq

-0.05

-1.155

Isoniazid02

-0.178

-1.085

Rifampicin4

0.588

-1.546

Ethambutol3

-0.993

-1.961

Meropenem3

-1.152

-2.268

Vancomycin16

-0.804

-2.369

Rv2680_day32

-1.217

-1.441

H37Rv_KO_MarP

-1.713

-1.833

hypoxia_3wks

0.187

-0.969

hypoxia_6wks

-1.222

0.152

glycerol

-2.583

-0.168

cholesterol

-1.049

-1.606

AJ

-1.168

-1.254

Bibs02

-0.747

-1.4

Bibs02c

-2.102

-0.221

BL6

-0.761

-0.132

BL6a

-1.317

0.154

BXD01

-1.418

-1.371

BXD010

-0.779

0.257

BXD011

-0.641

-0.646

BXD03

-0.435

0.459

BXD04

-1.147

-0.34

BXD05

-1.352

-0.112

BXD06

-1.341

-0.055

BXD07

-1.09

-0.028

BXD08

-1.138

-0.473

BXD09

-0.855

0.373

CAST

-1.532

-1.023

CCcont

0.938

1.183

DS01

-0.149

0.183

DS02

-1.323

0.473

DS04

-1.077

-0.162

DS0c

-1.204

-0.09

GP01

-0.715

-1.702

GP02

-0.981

-1.351

GP0c

-0.721

-1.992

NOD

-1.131

-0.392

NZO

-1.326

-2.331

PWK

-1.194

-1.128

H37Rv_KO_CtpC

-0.269

-0.672

H37Rv_KO_CtpD

-0.257

-0.562

H37Rv_KO_Rv1272

-0.938

0.055

H37Rv_KO_SugABC

-0.995

-1.608

H37Rv_KO_MbtN

-0.572

-1.085

Trans05

-1.212

-1.114

macrophage_unactivated

0.761

-0.155

IL1

-0.86

0.0

Rapamycin

-0.727

0.074

Tcell

0.411

0.078

GMCSF

-1.376

-1.64

IFNab

1.636

1.2

IFNg

-0.919

-1.376

IFNg_GMCSF1

-1.637

-1.203

Rv1432_day32

-1.845

-3.105

Rv1565c_day32

0.305

-1.271

secA2_input

1.019

-0.982

delta_Rv3594

-1.663

-3.431

delta_Rv3717

-1.792

-3.559

delta_Rv3811

-1.616

-3.066

delta_Rv0954

0.996

0.866

PonA1

0.185

0.26

EccD1_KO

0.852

0.71

EspI_KO

-0.114

0.445

PE35_KO

-0.385

0.42

PPE68_KO

-0.154

-0.09

glycerol2

-0.542

-0.347

lignocerate

-0.471

-0.807

oleate

-0.89

-0.94

phosphatidylcholine

-0.253

-0.478

acetate

0.618

0.123

glucAc

0.385

0.076

Rv0950ko

0.675

1.333

Rv1096ko

0.29

1.227

Rv3684ko

0.282

0.845

delta_otsA_trehalose

-0.201

-0.512