Top 10 genes with highest correlation to Rv0232/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0921/- | (cc=0.6382) | info on Rv0921/- |
| Rv0230c/php | (cc=0.6058) | info on Rv0230c/php |
| Rv1501/- | (cc=0.5498) | info on Rv1501/- |
| Rv3329/- | (cc=0.5448) | info on Rv3329/- |
| Rv0194/- | (cc=0.5273) | info on Rv0194/- |
| Rv0934/pstS1 | (cc=0.524) | info on Rv0934/pstS1 |
| Rv3473c/bpoA | (cc=0.5225) | info on Rv3473c/bpoA |
| Rv0083/- | (cc=0.5221) | info on Rv0083/- |
| Rv3026c/- | (cc=0.5137) | info on Rv3026c/- |
| Rv3389c/htdY | (cc=0.5036) | info on Rv3389c/htdY |
Correlation of Rv0232/- with Rv3329/-
Normalized LFCs for Rv0232/-:
(description and provenance of datasets)
| Rv0232/- | Rv3329/- | |
| Fe_supp_jason_reseq | -0.499 | 0.0 |
| low_pH_jason_reseq | -0.059 | 0.33 |
| NO_jason_reseq | -0.171 | 0.257 |
| B6_jason_reseq | 0.053 | 0.714 |
| MHCII_jason_reseq | 0.166 | 0.049 |
| Isoniazid02 | -1.643 | -2.423 |
| Rifampicin4 | 0.368 | 0.598 |
| Ethambutol3 | -1.762 | -1.639 |
| Meropenem3 | -1.523 | -2.211 |
| Vancomycin16 | -1.051 | -0.947 |
| Rv2680_day32 | 0.441 | -0.046 |
| H37Rv_KO_MarP | 0.03 | -0.354 |
| hypoxia_3wks | 0.207 | 0.323 |
| hypoxia_6wks | 0.388 | 0.418 |
| glycerol | -0.363 | 0.294 |
| cholesterol | 0.037 | 0.128 |
| AJ | -0.067 | 0.576 |
| Bibs02 | 0.262 | 0.114 |
| Bibs02c | -0.232 | -0.471 |
| BL6 | 0.179 | -0.095 |
| BL6a | -0.303 | -0.357 |
| BXD01 | -0.292 | 0.024 |
| BXD010 | -0.766 | -0.183 |
| BXD011 | -0.178 | -0.136 |
| BXD03 | 0.546 | 0.412 |
| BXD04 | 1.058 | -0.07 |
| BXD05 | 0.183 | 0.47 |
| BXD06 | -0.226 | -0.013 |
| BXD07 | -0.153 | 0.197 |
| BXD08 | 0.715 | 0.321 |
| BXD09 | -0.057 | -0.079 |
| CAST | 0.354 | 0.28 |
| CCcont | -0.106 | -0.159 |
| DS01 | 0.118 | 0.137 |
| DS02 | 0.098 | 0.444 |
| DS04 | -0.828 | 0.035 |
| DS0c | 0.71 | 0.079 |
| GP01 | -0.049 | 0.022 |
| GP02 | 0.568 | -0.011 |
| GP0c | 0.167 | -0.716 |
| NOD | -0.661 | -0.063 |
| NZO | -0.24 | 0.656 |
| PWK | 0.077 | 0.459 |
| H37Rv_KO_CtpC | -0.331 | -0.471 |
| H37Rv_KO_CtpD | -0.097 | -0.278 |
| H37Rv_KO_Rv1272 | -1.309 | -0.856 |
| H37Rv_KO_SugABC | 0.014 | -0.375 |
| H37Rv_KO_MbtN | 0.205 | -0.939 |
| Trans05 | -0.686 | -0.265 |
| macrophage_unactivated | 0.271 | -0.281 |
| IL1 | 0.427 | 0.098 |
| Rapamycin | 0.479 | 0.199 |
| Tcell | 0.28 | -0.042 |
| GMCSF | 0.544 | 0.069 |
| IFNab | 0.883 | -0.375 |
| IFNg | 0.198 | 0.088 |
| IFNg_GMCSF1 | 0.311 | 0.041 |
| Rv1432_day32 | 0.445 | -0.288 |
| Rv1565c_day32 | -0.199 | 0.627 |
| secA2_input | 0.988 | 0.343 |
| delta_Rv3594 | -0.795 | -0.314 |
| delta_Rv3717 | -0.113 | -0.258 |
| delta_Rv3811 | -0.393 | -0.421 |
| delta_Rv0954 | 0.022 | 0.094 |
| PonA1 | -0.305 | 0.264 |
| EccD1_KO | -0.572 | -0.428 |
| EspI_KO | -0.302 | 0.1 |
| PE35_KO | -0.811 | -0.7 |
| PPE68_KO | -1.206 | -0.115 |
| glycerol2 | 0.912 | 0.113 |
| lignocerate | 0.81 | 0.244 |
| oleate | 0.682 | 0.658 |
| phosphatidylcholine | 0.945 | 0.314 |
| acetate | 0.055 | -0.07 |
| glucAc | -0.024 | -0.458 |
| Rv0950ko | 0.697 | 0.054 |
| Rv1096ko | 0.67 | 0.262 |
| Rv3684ko | 0.458 | -0.118 |
| delta_otsA_trehalose | -2.297 | 0.232 |