Top 10 genes with highest correlation to Rv0213c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3812/PE_PGRS62 | (cc=0.5641) | info on Rv3812/PE_PGRS62 |
| Rv3233c/- | (cc=0.494) | info on Rv3233c/- |
| Rv0755c/PPE12 | (cc=0.4929) | info on Rv0755c/PPE12 |
| Rv0515/- | (cc=0.4854) | info on Rv0515/- |
| Rv3424c/- | (cc=0.4828) | info on Rv3424c/- |
| Rv1260/- | (cc=0.4703) | info on Rv1260/- |
| Rv3697c/vapC48 | (cc=0.4698) | info on Rv3697c/vapC48 |
| Rv2472/- | (cc=0.4678) | info on Rv2472/- |
| Rv0186A/mymT | (cc=0.4675) | info on Rv0186A/mymT |
| Rv0394c/- | (cc=0.461) | info on Rv0394c/- |
Correlation of Rv0213c/- with Rv0186A/mymT
Normalized LFCs for Rv0213c/-:
(description and provenance of datasets)
| Rv0213c/- | Rv0186A/mymT | |
| Fe_supp_jason_reseq | -0.581 | 0.862 |
| low_pH_jason_reseq | -0.489 | -0.607 |
| NO_jason_reseq | 0.155 | -1.11 |
| B6_jason_reseq | -0.017 | 1.965 |
| MHCII_jason_reseq | 1.053 | 1.383 |
| Isoniazid02 | -0.77 | -2.263 |
| Rifampicin4 | 0.217 | -1.018 |
| Ethambutol3 | -0.621 | -1.396 |
| Meropenem3 | -0.046 | -0.683 |
| Vancomycin16 | -0.05 | -1.435 |
| Rv2680_day32 | 0.122 | 0.131 |
| H37Rv_KO_MarP | 0.478 | 0.864 |
| hypoxia_3wks | 0.267 | -0.279 |
| hypoxia_6wks | 0.0 | -1.115 |
| glycerol | 0.171 | 0.55 |
| cholesterol | 0.236 | 0.195 |
| AJ | 0.684 | -0.56 |
| Bibs02 | 0.223 | 1.633 |
| Bibs02c | 1.075 | 2.38 |
| BL6 | 0.283 | 0.451 |
| BL6a | 0.653 | 1.355 |
| BXD01 | 0.331 | 0.76 |
| BXD010 | 0.277 | -1.491 |
| BXD011 | 0.264 | 0.04 |
| BXD03 | 0.085 | -0.396 |
| BXD04 | 0.036 | -0.362 |
| BXD05 | 0.039 | -0.677 |
| BXD06 | 0.237 | 0.534 |
| BXD07 | 0.219 | -0.48 |
| BXD08 | 0.35 | 0.915 |
| BXD09 | 0.0 | -0.67 |
| CAST | 1.081 | -0.252 |
| CCcont | 0.38 | 0.242 |
| DS01 | 0.676 | 1.234 |
| DS02 | 0.632 | 1.487 |
| DS04 | 0.52 | 1.31 |
| DS0c | 0.751 | -0.589 |
| GP01 | -0.851 | -1.795 |
| GP02 | 0.219 | -1.828 |
| GP0c | -0.326 | -1.514 |
| NOD | 1.539 | 0.706 |
| NZO | 0.461 | -0.737 |
| PWK | 0.672 | 0.331 |
| H37Rv_KO_CtpC | -0.048 | 1.319 |
| H37Rv_KO_CtpD | 0.637 | 1.033 |
| H37Rv_KO_Rv1272 | 0.057 | -2.124 |
| H37Rv_KO_SugABC | 0.964 | 1.407 |
| H37Rv_KO_MbtN | -0.529 | -0.573 |
| Trans05 | 0.543 | -2.71 |
| macrophage_unactivated | -0.287 | -0.145 |
| IL1 | -0.792 | -2.011 |
| Rapamycin | 0.0 | -2.934 |
| Tcell | 0.094 | 0.929 |
| GMCSF | -0.705 | -2.762 |
| IFNab | -0.06 | -2.76 |
| IFNg | -0.134 | -1.716 |
| IFNg_GMCSF1 | -0.031 | -2.13 |
| Rv1432_day32 | 0.442 | 0.18 |
| Rv1565c_day32 | 0.239 | -1.371 |
| secA2_input | 0.045 | 3.273 |
| delta_Rv3594 | -0.48 | -0.895 |
| delta_Rv3717 | -0.395 | -0.259 |
| delta_Rv3811 | -0.287 | -2.419 |
| delta_Rv0954 | -0.031 | 0.93 |
| PonA1 | -0.083 | 0.291 |
| EccD1_KO | 0.247 | 0.0 |
| EspI_KO | -0.399 | -1.363 |
| PE35_KO | -0.318 | -0.948 |
| PPE68_KO | -0.182 | -0.15 |
| glycerol2 | 0.248 | -1.422 |
| lignocerate | 0.192 | -1.286 |
| oleate | 0.189 | -0.888 |
| phosphatidylcholine | 0.186 | -1.13 |
| acetate | -0.193 | -0.564 |
| glucAc | -0.32 | -0.535 |
| Rv0950ko | 0.419 | 1.215 |
| Rv1096ko | 0.178 | -0.917 |
| Rv3684ko | 0.655 | -0.901 |
| delta_otsA_trehalose | -0.306 | -0.92 |