Top 10 genes with highest correlation to Rv0210/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1644/tsnR | (cc=0.5414) | info on Rv1644/tsnR |
| Rv3448/eccD4 | (cc=0.5083) | info on Rv3448/eccD4 |
| Rv3439c/- | (cc=0.5021) | info on Rv3439c/- |
| Rv2895c/viuB | (cc=0.4975) | info on Rv2895c/viuB |
| Rv1160/mutT2 | (cc=0.4927) | info on Rv1160/mutT2 |
| Rv1734c/- | (cc=0.4729) | info on Rv1734c/- |
| Rv0737/- | (cc=0.4725) | info on Rv0737/- |
| Rv1228/lpqX | (cc=0.4713) | info on Rv1228/lpqX |
| Rv0022c/whiB5 | (cc=0.4621) | info on Rv0022c/whiB5 |
| Rv0008c/- | (cc=0.4614) | info on Rv0008c/- |
Correlation of Rv0210/- with Rv1644/tsnR
Normalized LFCs for Rv0210/-:
(description and provenance of datasets)
| Rv0210/- | Rv1644/tsnR | |
| Fe_supp_jason_reseq | -0.843 | -0.755 |
| low_pH_jason_reseq | -0.348 | -0.78 |
| NO_jason_reseq | -0.21 | 0.898 |
| B6_jason_reseq | 0.393 | -0.134 |
| MHCII_jason_reseq | 0.495 | 0.317 |
| Isoniazid02 | 0.396 | -0.132 |
| Rifampicin4 | 0.246 | -0.084 |
| Ethambutol3 | 0.919 | 0.81 |
| Meropenem3 | 0.391 | -0.065 |
| Vancomycin16 | 0.422 | 0.846 |
| Rv2680_day32 | 1.617 | 0.924 |
| H37Rv_KO_MarP | -0.154 | -0.821 |
| hypoxia_3wks | 0.471 | -0.235 |
| hypoxia_6wks | 0.954 | 1.46 |
| glycerol | 0.647 | -1.115 |
| cholesterol | -0.046 | -0.902 |
| AJ | 0.519 | -0.457 |
| Bibs02 | 0.633 | -0.882 |
| Bibs02c | -0.277 | -1.487 |
| BL6 | 0.424 | -0.113 |
| BL6a | -0.251 | -1.159 |
| BXD01 | 0.059 | -0.203 |
| BXD010 | 0.287 | 0.024 |
| BXD011 | -0.482 | -0.309 |
| BXD03 | 0.359 | -0.155 |
| BXD04 | -0.486 | -0.48 |
| BXD05 | 0.189 | -0.569 |
| BXD06 | -0.028 | -0.288 |
| BXD07 | 0.042 | -0.332 |
| BXD08 | -0.122 | 0.405 |
| BXD09 | -0.272 | -0.507 |
| CAST | -0.012 | 0.576 |
| CCcont | -0.096 | -0.93 |
| DS01 | 0.154 | -1.228 |
| DS02 | 0.629 | -0.389 |
| DS04 | 0.0 | -0.374 |
| DS0c | 0.575 | -0.867 |
| GP01 | 0.447 | 0.413 |
| GP02 | 0.724 | 0.573 |
| GP0c | 0.269 | 0.732 |
| NOD | 0.885 | 0.013 |
| NZO | 0.743 | 0.212 |
| PWK | 0.09 | 0.195 |
| H37Rv_KO_CtpC | -0.464 | -0.134 |
| H37Rv_KO_CtpD | -0.088 | -0.642 |
| H37Rv_KO_Rv1272 | -0.196 | -0.56 |
| H37Rv_KO_SugABC | 1.002 | 0.888 |
| H37Rv_KO_MbtN | -0.486 | -0.208 |
| Trans05 | -0.465 | -0.255 |
| macrophage_unactivated | 0.0 | -1.023 |
| IL1 | 0.469 | 0.409 |
| Rapamycin | -0.12 | -0.675 |
| Tcell | -0.873 | -0.182 |
| GMCSF | -0.393 | -0.568 |
| IFNab | 0.227 | -0.073 |
| IFNg | -0.139 | -0.216 |
| IFNg_GMCSF1 | 0.273 | -0.151 |
| Rv1432_day32 | 1.001 | 1.456 |
| Rv1565c_day32 | -0.352 | -1.401 |
| secA2_input | -0.122 | 0.532 |
| delta_Rv3594 | 0.872 | 1.126 |
| delta_Rv3717 | 1.377 | 1.769 |
| delta_Rv3811 | 1.013 | 1.413 |
| delta_Rv0954 | 0.795 | 0.26 |
| PonA1 | 1.181 | -0.927 |
| EccD1_KO | 0.388 | 0.155 |
| EspI_KO | -0.285 | -0.057 |
| PE35_KO | -0.458 | -0.263 |
| PPE68_KO | -0.234 | -0.262 |
| glycerol2 | 0.717 | 0.261 |
| lignocerate | 0.985 | 0.572 |
| oleate | 0.621 | -0.281 |
| phosphatidylcholine | 0.581 | 0.618 |
| acetate | 0.228 | 0.118 |
| glucAc | 0.484 | 0.251 |
| Rv0950ko | 0.335 | 0.597 |
| Rv1096ko | 0.956 | -0.166 |
| Rv3684ko | 0.115 | -0.141 |
| delta_otsA_trehalose | 0.625 | 1.053 |