Top 10 genes with highest correlation to Rv0182c/sigG:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2287/yjcE | (cc=0.7422) | info on Rv2287/yjcE |
| Rv3749c/- | (cc=0.7014) | info on Rv3749c/- |
| Rv1913/- | (cc=0.681) | info on Rv1913/- |
| Rv0293c/- | (cc=0.6471) | info on Rv0293c/- |
| Rv0187/- | (cc=0.6303) | info on Rv0187/- |
| Rv1356c/- | (cc=0.5579) | info on Rv1356c/- |
| Rv2668/- | (cc=0.5336) | info on Rv2668/- |
| Rv0644c/mmaA2 | (cc=0.5302) | info on Rv0644c/mmaA2 |
| Rv1472/echA12 | (cc=0.5244) | info on Rv1472/echA12 |
| Rv0818/- | (cc=0.5216) | info on Rv0818/- |
Correlation of Rv0182c/sigG with Rv0293c/-
Normalized LFCs for Rv0182c/sigG:
(description and provenance of datasets)
| Rv0182c/sigG | Rv0293c/- | |
| Fe_supp_jason_reseq | -0.504 | -0.213 |
| low_pH_jason_reseq | -0.105 | 0.351 |
| NO_jason_reseq | 0.116 | -0.263 |
| B6_jason_reseq | 0.824 | 0.243 |
| MHCII_jason_reseq | -0.325 | 0.673 |
| Isoniazid02 | -0.579 | 0.359 |
| Rifampicin4 | -0.769 | -0.097 |
| Ethambutol3 | 0.495 | -0.044 |
| Meropenem3 | -0.231 | 1.803 |
| Vancomycin16 | -0.21 | 0.032 |
| Rv2680_day32 | 1.17 | -0.307 |
| H37Rv_KO_MarP | 0.603 | 0.119 |
| hypoxia_3wks | -0.498 | 1.248 |
| hypoxia_6wks | -0.067 | 0.94 |
| glycerol | -0.572 | 0.0 |
| cholesterol | -0.802 | -0.302 |
| AJ | -0.425 | 0.435 |
| Bibs02 | -0.984 | -0.207 |
| Bibs02c | -0.255 | 0.379 |
| BL6 | 0.64 | 0.6 |
| BL6a | -0.145 | 0.733 |
| BXD01 | 0.017 | 0.381 |
| BXD010 | 0.165 | 0.375 |
| BXD011 | 1.856 | 0.891 |
| BXD03 | 0.301 | 0.827 |
| BXD04 | 0.297 | 0.619 |
| BXD05 | -0.218 | 1.087 |
| BXD06 | 0.363 | 0.816 |
| BXD07 | -0.018 | 0.748 |
| BXD08 | -0.216 | 0.699 |
| BXD09 | -0.28 | 0.66 |
| CAST | 0.224 | 0.319 |
| CCcont | -0.707 | 0.527 |
| DS01 | -0.323 | -0.354 |
| DS02 | -0.706 | -0.072 |
| DS04 | -1.074 | 0.493 |
| DS0c | -0.079 | -0.206 |
| GP01 | -0.13 | -0.102 |
| GP02 | 1.742 | -0.042 |
| GP0c | 0.222 | -0.771 |
| NOD | -0.264 | 0.628 |
| NZO | 0.035 | 0.049 |
| PWK | -0.19 | 0.141 |
| H37Rv_KO_CtpC | -0.112 | -0.661 |
| H37Rv_KO_CtpD | 1.372 | 0.505 |
| H37Rv_KO_Rv1272 | 0.348 | 0.394 |
| H37Rv_KO_SugABC | -1.435 | 0.165 |
| H37Rv_KO_MbtN | -0.366 | -0.313 |
| Trans05 | -0.159 | 0.358 |
| macrophage_unactivated | -1.212 | 0.253 |
| IL1 | -2.758 | -2.619 |
| Rapamycin | -3.658 | -2.332 |
| Tcell | 1.531 | 2.441 |
| GMCSF | -2.492 | -1.143 |
| IFNab | -2.769 | -2.276 |
| IFNg | -2.929 | -1.994 |
| IFNg_GMCSF1 | -3.397 | -2.724 |
| Rv1432_day32 | 2.179 | -0.111 |
| Rv1565c_day32 | 0.292 | 0.406 |
| secA2_input | 0.344 | -0.246 |
| delta_Rv3594 | -0.895 | 1.26 |
| delta_Rv3717 | -0.364 | 0.395 |
| delta_Rv3811 | -0.332 | 1.142 |
| delta_Rv0954 | 0.084 | 1.162 |
| PonA1 | 0.042 | 0.926 |
| EccD1_KO | -0.079 | 0.194 |
| EspI_KO | -0.123 | 0.074 |
| PE35_KO | -0.426 | -0.076 |
| PPE68_KO | -0.32 | 0.419 |
| glycerol2 | -0.677 | 0.073 |
| lignocerate | -0.947 | 0.457 |
| oleate | -1.34 | -0.089 |
| phosphatidylcholine | -0.569 | 0.535 |
| acetate | -0.903 | 0.274 |
| glucAc | -0.661 | 0.096 |
| Rv0950ko | 0.066 | 0.552 |
| Rv1096ko | 0.087 | 0.136 |
| Rv3684ko | -0.2 | 1.1 |
| delta_otsA_trehalose | -0.977 | -0.297 |