Top 10 genes with highest correlation to Rv0157/pntB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0155/pntAa | (cc=0.8449) | info on Rv0155/pntAa |
| Rv0247c/- | (cc=0.5264) | info on Rv0247c/- |
| Rv3848/- | (cc=0.4403) | info on Rv3848/- |
| Rv3755c/- | (cc=0.4385) | info on Rv3755c/- |
| Rv3160c/- | (cc=0.4151) | info on Rv3160c/- |
| Rv2140c/TB18.6 | (cc=0.4082) | info on Rv2140c/TB18.6 |
| Rv2967c/pca | (cc=0.406) | info on Rv2967c/pca |
| Rv1322A/- | (cc=0.4028) | info on Rv1322A/- |
| Rv3433c/- | (cc=0.398) | info on Rv3433c/- |
| Rv3615c/espC | (cc=0.3928) | info on Rv3615c/espC |
Correlation of Rv0157/pntB with Rv0155/pntAa
Normalized LFCs for Rv0157/pntB:
(description and provenance of datasets)
| Rv0157/pntB | Rv0155/pntAa | |
| Fe_supp_jason_reseq | 0.685 | -0.169 |
| low_pH_jason_reseq | -0.052 | -1.506 |
| NO_jason_reseq | -0.336 | -0.638 |
| B6_jason_reseq | -2.647 | -2.466 |
| MHCII_jason_reseq | -2.331 | -2.743 |
| Isoniazid02 | 1.312 | 2.043 |
| Rifampicin4 | -0.845 | 0.864 |
| Ethambutol3 | 0.201 | 0.404 |
| Meropenem3 | -0.223 | -0.631 |
| Vancomycin16 | -0.316 | 0.345 |
| Rv2680_day32 | -0.741 | -0.454 |
| H37Rv_KO_MarP | 1.851 | 1.37 |
| hypoxia_3wks | -3.174 | -1.914 |
| hypoxia_6wks | -2.291 | -1.616 |
| glycerol | 0.856 | 1.836 |
| cholesterol | -0.503 | 0.227 |
| AJ | -0.054 | -1.187 |
| Bibs02 | -1.409 | -1.661 |
| Bibs02c | -2.176 | -2.474 |
| BL6 | -0.746 | -0.949 |
| BL6a | -0.092 | -0.71 |
| BXD01 | -0.582 | -0.9 |
| BXD010 | -0.618 | -0.521 |
| BXD011 | 0.056 | -0.8 |
| BXD03 | 0.552 | -0.094 |
| BXD04 | -0.181 | -1.028 |
| BXD05 | -0.858 | -0.616 |
| BXD06 | -0.644 | -0.838 |
| BXD07 | -0.571 | -1.151 |
| BXD08 | -0.38 | -0.415 |
| BXD09 | 0.0 | -0.439 |
| CAST | -1.373 | -0.245 |
| CCcont | 2.539 | 2.273 |
| DS01 | -2.936 | -2.342 |
| DS02 | -2.872 | -1.649 |
| DS04 | -1.081 | -1.924 |
| DS0c | -1.571 | -1.499 |
| GP01 | -1.476 | -1.167 |
| GP02 | -1.244 | -0.984 |
| GP0c | -1.826 | -1.537 |
| NOD | 1.702 | 0.713 |
| NZO | -0.822 | 0.066 |
| PWK | -0.745 | -1.232 |
| H37Rv_KO_CtpC | 2.084 | 1.566 |
| H37Rv_KO_CtpD | 0.212 | 0.161 |
| H37Rv_KO_Rv1272 | -0.63 | -1.527 |
| H37Rv_KO_SugABC | -0.408 | -0.105 |
| H37Rv_KO_MbtN | -0.294 | -0.035 |
| Trans05 | -1.071 | -0.821 |
| macrophage_unactivated | 1.079 | 1.064 |
| IL1 | -0.581 | -1.011 |
| Rapamycin | 0.417 | -1.046 |
| Tcell | 1.062 | 0.0 |
| GMCSF | -0.642 | -0.314 |
| IFNab | 0.121 | 0.112 |
| IFNg | -2.309 | -2.288 |
| IFNg_GMCSF1 | -1.59 | -1.898 |
| Rv1432_day32 | -1.113 | -1.469 |
| Rv1565c_day32 | -0.881 | -1.151 |
| secA2_input | 0.18 | 0.792 |
| delta_Rv3594 | -0.907 | -1.322 |
| delta_Rv3717 | -0.838 | -1.042 |
| delta_Rv3811 | -1.535 | -1.579 |
| delta_Rv0954 | 2.629 | 2.199 |
| PonA1 | -3.258 | -3.105 |
| EccD1_KO | -0.329 | -0.312 |
| EspI_KO | 0.83 | 0.086 |
| PE35_KO | 0.478 | 0.452 |
| PPE68_KO | 0.102 | -0.269 |
| glycerol2 | 0.646 | -0.469 |
| lignocerate | -0.264 | -1.626 |
| oleate | -0.023 | -0.645 |
| phosphatidylcholine | -0.787 | -1.612 |
| acetate | 0.291 | -0.53 |
| glucAc | -0.263 | -1.638 |
| Rv0950ko | -0.398 | -0.214 |
| Rv1096ko | -1.674 | -1.529 |
| Rv3684ko | 0.38 | 0.406 |
| delta_otsA_trehalose | -0.896 | -0.502 |