TnSeqCorr

Top 10 genes with highest correlation to Rv0120c/fusA2:

update plotcorrelationlink to info on gene
Rv3763/lpqH (cc=0.4902) info on Rv3763/lpqH
Rv0033/acpA (cc=0.4868) info on Rv0033/acpA
Rv2678c/hemE (cc=0.453) info on Rv2678c/hemE
Rv1051c/- (cc=0.4431) info on Rv1051c/-
Rv3210c/- (cc=0.442) info on Rv3210c/-
Rv2373c/dnaJ2 (cc=0.4376) info on Rv2373c/dnaJ2
Rv0076c/- (cc=0.4305) info on Rv0076c/-
Rv2882c/frr (cc=0.4299) info on Rv2882c/frr
Rv0821c/phoY2 (cc=0.419) info on Rv0821c/phoY2
Rv2789c/fadE21 (cc=0.4133) info on Rv2789c/fadE21

Correlation of Rv0120c/fusA2 with Rv3763/lpqH

Normalized LFCs for Rv0120c/fusA2:
(description and provenance of datasets)
Rv0120c/fusA2Rv3763/lpqH
Fe_supp_jason_reseq

-0.257

-0.202

low_pH_jason_reseq

-0.087

-0.4

NO_jason_reseq

-0.664

0.063

B6_jason_reseq

-0.088

-1.653

MHCII_jason_reseq

-0.44

-0.621

Isoniazid02

-0.146

-0.784

Rifampicin4

0.0

0.585

Ethambutol3

0.039

0.574

Meropenem3

0.075

0.397

Vancomycin16

0.326

0.082

Rv2680_day32

1.017

-0.448

H37Rv_KO_MarP

0.347

0.382

hypoxia_3wks

-0.215

-0.63

hypoxia_6wks

-1.059

-0.654

glycerol

0.202

-0.462

cholesterol

0.073

-0.529

AJ

0.728

-1.565

Bibs02

0.183

-1.174

Bibs02c

0.488

-0.923

BL6

0.654

-0.726

BL6a

0.462

0.033

BXD01

0.838

-0.092

BXD010

1.493

-0.091

BXD011

1.094

0.221

BXD03

0.79

0.09

BXD04

0.093

0.398

BXD05

0.422

0.652

BXD06

0.338

0.48

BXD07

0.809

0.092

BXD08

1.341

1.565

BXD09

0.643

0.38

CAST

0.853

0.038

CCcont

0.733

0.818

DS01

1.042

1.015

DS02

0.057

-0.498

DS04

0.788

-1.185

DS0c

0.55

-0.115

GP01

-0.571

0.127

GP02

0.448

0.214

GP0c

1.117

0.975

NOD

-0.247

-0.991

NZO

0.337

-2.663

PWK

0.898

0.283

H37Rv_KO_CtpC

0.54

-1.656

H37Rv_KO_CtpD

-0.034

0.628

H37Rv_KO_Rv1272

-0.239

-0.025

H37Rv_KO_SugABC

-1.246

-1.452

H37Rv_KO_MbtN

0.874

-1.665

Trans05

0.434

0.404

macrophage_unactivated

-0.243

-0.486

IL1

-0.552

-1.833

Rapamycin

0.896

-1.062

Tcell

-0.89

-1.336

GMCSF

1.127

0.042

IFNab

0.29

-0.466

IFNg

0.067

-1.037

IFNg_GMCSF1

-0.408

-0.484

Rv1432_day32

0.727

-0.263

Rv1565c_day32

-0.169

-1.148

secA2_input

-0.294

-0.687

delta_Rv3594

0.382

-0.509

delta_Rv3717

-0.263

0.0

delta_Rv3811

0.602

-0.495

delta_Rv0954

-0.052

-1.796

PonA1

0.362

0.254

EccD1_KO

-0.678

-2.789

EspI_KO

-1.469

-1.902

PE35_KO

-0.683

-1.423

PPE68_KO

-1.328

-2.134

glycerol2

0.705

1.0

lignocerate

0.784

0.22

oleate

0.203

-1.808

phosphatidylcholine

0.042

-0.14

acetate

0.69

0.095

glucAc

1.508

0.749

Rv0950ko

0.47

1.161

Rv1096ko

1.282

2.787

Rv3684ko

0.262

1.189

delta_otsA_trehalose

0.058

1.311