Top 10 genes with highest correlation to Rv0077c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0347/- | (cc=0.5037) | info on Rv0347/- |
| Rv3337/- | (cc=0.493) | info on Rv3337/- |
| Rv0372c/- | (cc=0.4813) | info on Rv0372c/- |
| Rv1262c/- | (cc=0.4677) | info on Rv1262c/- |
| Rv1761c/- | (cc=0.4593) | info on Rv1761c/- |
| Rv0276/- | (cc=0.4468) | info on Rv0276/- |
| Rv2994/- | (cc=0.4383) | info on Rv2994/- |
| Rv0633c/- | (cc=0.4357) | info on Rv0633c/- |
| Rv3714c/- | (cc=0.4247) | info on Rv3714c/- |
| Rv0858c/dapC | (cc=0.4236) | info on Rv0858c/dapC |
Correlation of Rv0077c/- with Rv1761c/-
Normalized LFCs for Rv0077c/-:
(description and provenance of datasets)
| Rv0077c/- | Rv1761c/- | |
| Fe_supp_jason_reseq | -0.221 | -0.57 |
| low_pH_jason_reseq | -0.381 | -0.862 |
| NO_jason_reseq | 0.029 | -0.165 |
| B6_jason_reseq | 0.538 | -0.094 |
| MHCII_jason_reseq | 0.238 | 1.319 |
| Isoniazid02 | 0.444 | -0.093 |
| Rifampicin4 | 0.165 | 0.057 |
| Ethambutol3 | 0.555 | 0.77 |
| Meropenem3 | 0.528 | -0.301 |
| Vancomycin16 | 0.239 | -0.17 |
| Rv2680_day32 | -1.331 | 0.183 |
| H37Rv_KO_MarP | 0.349 | 0.948 |
| hypoxia_3wks | 0.546 | -0.044 |
| hypoxia_6wks | 0.37 | 1.833 |
| glycerol | 0.098 | 0.578 |
| cholesterol | -0.208 | 0.589 |
| AJ | 0.555 | -0.296 |
| Bibs02 | 1.245 | 0.813 |
| Bibs02c | -0.045 | -1.062 |
| BL6 | -0.449 | -0.495 |
| BL6a | 0.274 | -0.61 |
| BXD01 | -0.404 | -0.707 |
| BXD010 | 0.349 | 0.175 |
| BXD011 | 0.035 | -0.795 |
| BXD03 | 0.338 | -0.165 |
| BXD04 | 0.068 | -0.704 |
| BXD05 | 0.639 | 0.028 |
| BXD06 | 0.225 | 0.101 |
| BXD07 | 0.315 | 0.171 |
| BXD08 | -0.058 | -0.355 |
| BXD09 | 0.805 | -0.61 |
| CAST | 0.375 | -0.267 |
| CCcont | -0.551 | -1.212 |
| DS01 | 0.681 | -1.345 |
| DS02 | 0.148 | 0.337 |
| DS04 | 0.804 | -0.136 |
| DS0c | 0.03 | -0.563 |
| GP01 | 1.734 | 0.835 |
| GP02 | 0.194 | -0.368 |
| GP0c | 0.235 | -0.269 |
| NOD | -0.216 | 0.831 |
| NZO | 0.373 | -0.504 |
| PWK | 0.26 | -0.041 |
| H37Rv_KO_CtpC | -1.045 | 0.091 |
| H37Rv_KO_CtpD | -0.704 | -0.271 |
| H37Rv_KO_Rv1272 | -0.411 | -1.506 |
| H37Rv_KO_SugABC | -0.952 | -2.552 |
| H37Rv_KO_MbtN | -0.973 | -0.836 |
| Trans05 | -0.057 | -0.288 |
| macrophage_unactivated | -0.12 | 0.72 |
| IL1 | 0.303 | 0.059 |
| Rapamycin | 0.046 | 0.236 |
| Tcell | 0.049 | 0.313 |
| GMCSF | 0.573 | -0.161 |
| IFNab | 0.308 | 0.206 |
| IFNg | 0.596 | 0.764 |
| IFNg_GMCSF1 | 0.0 | 0.214 |
| Rv1432_day32 | -0.478 | 0.269 |
| Rv1565c_day32 | -0.066 | -0.531 |
| secA2_input | 1.403 | -0.08 |
| delta_Rv3594 | -1.007 | -0.717 |
| delta_Rv3717 | -0.868 | -0.448 |
| delta_Rv3811 | -1.152 | -0.529 |
| delta_Rv0954 | 0.523 | -0.401 |
| PonA1 | 0.347 | 0.554 |
| EccD1_KO | 0.059 | -0.418 |
| EspI_KO | -0.813 | -0.491 |
| PE35_KO | -0.426 | -0.405 |
| PPE68_KO | -0.499 | -0.099 |
| glycerol2 | -0.289 | -1.201 |
| lignocerate | -0.399 | -1.019 |
| oleate | -0.425 | 0.217 |
| phosphatidylcholine | -0.459 | -0.41 |
| acetate | -0.195 | -1.496 |
| glucAc | -0.777 | -1.737 |
| Rv0950ko | 0.633 | 0.929 |
| Rv1096ko | 1.327 | 0.603 |
| Rv3684ko | 1.225 | -0.442 |
| delta_otsA_trehalose | 1.344 | 3.015 |