Top 10 genes with highest correlation to Rv0077c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0347/- | (cc=0.5037) | info on Rv0347/- |
| Rv3337/- | (cc=0.493) | info on Rv3337/- |
| Rv0372c/- | (cc=0.4813) | info on Rv0372c/- |
| Rv1262c/- | (cc=0.4677) | info on Rv1262c/- |
| Rv1761c/- | (cc=0.4593) | info on Rv1761c/- |
| Rv0276/- | (cc=0.4468) | info on Rv0276/- |
| Rv2994/- | (cc=0.4383) | info on Rv2994/- |
| Rv0633c/- | (cc=0.4357) | info on Rv0633c/- |
| Rv3714c/- | (cc=0.4247) | info on Rv3714c/- |
| Rv0858c/dapC | (cc=0.4236) | info on Rv0858c/dapC |
Correlation of Rv0077c/- with Rv0347/-
Normalized LFCs for Rv0077c/-:
(description and provenance of datasets)
| Rv0077c/- | Rv0347/- | |
| Fe_supp_jason_reseq | -0.221 | -0.63 |
| low_pH_jason_reseq | -0.381 | -1.29 |
| NO_jason_reseq | 0.029 | 0.129 |
| B6_jason_reseq | 0.538 | 1.434 |
| MHCII_jason_reseq | 0.238 | 0.048 |
| Isoniazid02 | 0.444 | 1.582 |
| Rifampicin4 | 0.165 | -0.165 |
| Ethambutol3 | 0.555 | 1.39 |
| Meropenem3 | 0.528 | -0.151 |
| Vancomycin16 | 0.239 | 0.589 |
| Rv2680_day32 | -1.331 | 0.0 |
| H37Rv_KO_MarP | 0.349 | 0.535 |
| hypoxia_3wks | 0.546 | -0.255 |
| hypoxia_6wks | 0.37 | 0.251 |
| glycerol | 0.098 | 1.191 |
| cholesterol | -0.208 | 0.568 |
| AJ | 0.555 | 0.212 |
| Bibs02 | 1.245 | 0.717 |
| Bibs02c | -0.045 | -0.359 |
| BL6 | -0.449 | 1.056 |
| BL6a | 0.274 | -1.036 |
| BXD01 | -0.404 | -0.751 |
| BXD010 | 0.349 | -0.67 |
| BXD011 | 0.035 | 0.0 |
| BXD03 | 0.338 | -1.115 |
| BXD04 | 0.068 | -0.713 |
| BXD05 | 0.639 | -0.776 |
| BXD06 | 0.225 | -0.043 |
| BXD07 | 0.315 | 0.383 |
| BXD08 | -0.058 | -0.696 |
| BXD09 | 0.805 | -0.735 |
| CAST | 0.375 | -0.15 |
| CCcont | -0.551 | -0.372 |
| DS01 | 0.681 | -0.236 |
| DS02 | 0.148 | 1.282 |
| DS04 | 0.804 | -0.062 |
| DS0c | 0.03 | -0.456 |
| GP01 | 1.734 | -0.031 |
| GP02 | 0.194 | -0.527 |
| GP0c | 0.235 | -0.551 |
| NOD | -0.216 | -1.061 |
| NZO | 0.373 | 0.737 |
| PWK | 0.26 | -0.264 |
| H37Rv_KO_CtpC | -1.045 | -1.456 |
| H37Rv_KO_CtpD | -0.704 | -1.454 |
| H37Rv_KO_Rv1272 | -0.411 | -1.759 |
| H37Rv_KO_SugABC | -0.952 | -1.137 |
| H37Rv_KO_MbtN | -0.973 | -1.089 |
| Trans05 | -0.057 | -0.988 |
| macrophage_unactivated | -0.12 | -1.016 |
| IL1 | 0.303 | -0.611 |
| Rapamycin | 0.046 | -0.632 |
| Tcell | 0.049 | -0.16 |
| GMCSF | 0.573 | 0.364 |
| IFNab | 0.308 | 0.142 |
| IFNg | 0.596 | 0.0 |
| IFNg_GMCSF1 | 0.0 | 0.0 |
| Rv1432_day32 | -0.478 | 0.0 |
| Rv1565c_day32 | -0.066 | 1.579 |
| secA2_input | 1.403 | 0.606 |
| delta_Rv3594 | -1.007 | 0.788 |
| delta_Rv3717 | -0.868 | -0.438 |
| delta_Rv3811 | -1.152 | 0.287 |
| delta_Rv0954 | 0.523 | 0.0 |
| PonA1 | 0.347 | 0.323 |
| EccD1_KO | 0.059 | -0.145 |
| EspI_KO | -0.813 | -0.53 |
| PE35_KO | -0.426 | -1.003 |
| PPE68_KO | -0.499 | -1.469 |
| glycerol2 | -0.289 | -0.88 |
| lignocerate | -0.399 | -0.471 |
| oleate | -0.425 | -0.89 |
| phosphatidylcholine | -0.459 | -0.704 |
| acetate | -0.195 | -0.836 |
| glucAc | -0.777 | 0.0 |
| Rv0950ko | 0.633 | 1.848 |
| Rv1096ko | 1.327 | 3.384 |
| Rv3684ko | 1.225 | 3.674 |
| delta_otsA_trehalose | 1.344 | 2.561 |