Top 10 genes with highest correlation to Rv3889c/espG2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1116A/- | (cc=0.4671) | info on Rv1116A/- |
| Rv0271c/fadE6 | (cc=0.4584) | info on Rv0271c/fadE6 |
| Rv0679c/- | (cc=0.4573) | info on Rv0679c/- |
| Rv0218/- | (cc=0.4407) | info on Rv0218/- |
| Rv1004c/- | (cc=0.4335) | info on Rv1004c/- |
| Rv3440c/- | (cc=0.429) | info on Rv3440c/- |
| Rv0852/fadD16 | (cc=0.4133) | info on Rv0852/fadD16 |
| Rv2263/- | (cc=0.4095) | info on Rv2263/- |
| Rv3107c/agpS | (cc=0.3981) | info on Rv3107c/agpS |
| Rv0599c/vapB27 | (cc=0.394) | info on Rv0599c/vapB27 |
Correlation of Rv3889c/espG2 with Rv1116A/-
Normalized LFCs for Rv3889c/espG2:
(description and provenance of datasets)
| Rv3889c/espG2 | Rv1116A/- | |
| Fe_supp_jason_reseq | 0.175 | 0.857 |
| low_pH_jason_reseq | 0.045 | -0.673 |
| NO_jason_reseq | -0.181 | -0.404 |
| B6_jason_reseq | -0.069 | 1.454 |
| MHCII_jason_reseq | 0.82 | 0.601 |
| Isoniazid02 | -0.102 | 0.052 |
| Rifampicin4 | 0.287 | 0.284 |
| Ethambutol3 | 0.094 | 0.276 |
| Meropenem3 | 0.139 | 1.617 |
| Vancomycin16 | 0.178 | 0.154 |
| Rv2680_day32 | 0.058 | 0.623 |
| H37Rv_KO_MarP | 0.095 | 0.313 |
| hypoxia_3wks | 0.411 | -0.156 |
| hypoxia_6wks | 0.324 | 0.165 |
| glycerol | 0.0 | 0.37 |
| cholesterol | -0.006 | 0.493 |
| AJ | -0.113 | 0.6 |
| Bibs02 | 0.579 | 0.714 |
| Bibs02c | 0.106 | -0.579 |
| BL6 | -0.043 | 0.52 |
| BL6a | 0.0 | -0.211 |
| BXD01 | -0.173 | 0.246 |
| BXD010 | -0.767 | 0.079 |
| BXD011 | -0.715 | -0.303 |
| BXD03 | -0.275 | 0.076 |
| BXD04 | -0.071 | -0.01 |
| BXD05 | -0.354 | 0.206 |
| BXD06 | -0.388 | 0.171 |
| BXD07 | -0.225 | -0.039 |
| BXD08 | -0.334 | -0.258 |
| BXD09 | -0.132 | -0.206 |
| CAST | -0.506 | -0.541 |
| CCcont | -0.662 | -0.093 |
| DS01 | 0.241 | 0.756 |
| DS02 | -0.028 | 0.462 |
| DS04 | -0.138 | -0.03 |
| DS0c | 0.247 | 0.91 |
| GP01 | 0.034 | 0.0 |
| GP02 | -0.358 | 0.163 |
| GP0c | -0.342 | 0.083 |
| NOD | -0.288 | 0.0 |
| NZO | -0.579 | -0.082 |
| PWK | -0.203 | 0.243 |
| H37Rv_KO_CtpC | 0.028 | -0.075 |
| H37Rv_KO_CtpD | 0.187 | 0.041 |
| H37Rv_KO_Rv1272 | 0.49 | 0.7 |
| H37Rv_KO_SugABC | 0.255 | 0.162 |
| H37Rv_KO_MbtN | -0.059 | 0.494 |
| Trans05 | -0.093 | 0.548 |
| macrophage_unactivated | -0.489 | -1.152 |
| IL1 | -0.439 | -1.083 |
| Rapamycin | -0.675 | -1.086 |
| Tcell | -0.766 | -0.411 |
| GMCSF | -0.504 | -0.768 |
| IFNab | -0.218 | -0.333 |
| IFNg | -0.265 | -0.799 |
| IFNg_GMCSF1 | -0.041 | 0.295 |
| Rv1432_day32 | 0.136 | 0.272 |
| Rv1565c_day32 | 0.182 | -0.444 |
| secA2_input | -0.142 | 0.82 |
| delta_Rv3594 | -0.392 | -0.407 |
| delta_Rv3717 | -0.742 | -0.411 |
| delta_Rv3811 | -0.454 | 0.039 |
| delta_Rv0954 | 0.052 | -0.116 |
| PonA1 | -0.57 | -0.058 |
| EccD1_KO | 0.217 | -0.138 |
| EspI_KO | -1.226 | 0.679 |
| PE35_KO | -0.053 | 0.248 |
| PPE68_KO | -0.589 | 0.47 |
| glycerol2 | 0.16 | 1.005 |
| lignocerate | -0.052 | 0.51 |
| oleate | 0.508 | 1.144 |
| phosphatidylcholine | -0.039 | 0.766 |
| acetate | -0.893 | -0.465 |
| glucAc | -0.909 | -0.348 |
| Rv0950ko | 0.353 | 0.766 |
| Rv1096ko | -0.22 | -0.054 |
| Rv3684ko | -0.419 | -0.544 |
| delta_otsA_trehalose | -0.782 | -0.138 |