Top 10 genes with highest correlation to Rv3735/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2039c/- | (cc=0.4322) | info on Rv2039c/- |
| Rv2823c/- | (cc=0.4301) | info on Rv2823c/- |
| Rv0943c/- | (cc=0.4209) | info on Rv0943c/- |
| Rv3830c/- | (cc=0.4203) | info on Rv3830c/- |
| Rv2536/- | (cc=0.4186) | info on Rv2536/- |
| Rv2857c/- | (cc=0.4106) | info on Rv2857c/- |
| Rv1752/- | (cc=0.4082) | info on Rv1752/- |
| Rv3338/- | (cc=0.4038) | info on Rv3338/- |
| Rv3470c/ilvB2 | (cc=0.4031) | info on Rv3470c/ilvB2 |
| Rv3894c/eccC2 | (cc=0.4021) | info on Rv3894c/eccC2 |
Correlation of Rv3735/- with Rv2039c/-
Normalized LFCs for Rv3735/-:
(description and provenance of datasets)
| Rv3735/- | Rv2039c/- | |
| Fe_supp_jason_reseq | -0.748 | 0.128 |
| low_pH_jason_reseq | 0.417 | 0.035 |
| NO_jason_reseq | -1.415 | -0.929 |
| B6_jason_reseq | -1.937 | -0.955 |
| MHCII_jason_reseq | -1.524 | -1.376 |
| Isoniazid02 | -0.057 | 1.442 |
| Rifampicin4 | 0.474 | -0.203 |
| Ethambutol3 | 0.153 | -0.342 |
| Meropenem3 | 0.406 | -0.625 |
| Vancomycin16 | 0.265 | 0.324 |
| Rv2680_day32 | -0.947 | 0.0 |
| H37Rv_KO_MarP | 0.323 | -0.151 |
| hypoxia_3wks | 0.104 | -0.124 |
| hypoxia_6wks | 0.541 | 0.33 |
| glycerol | 1.134 | -0.945 |
| cholesterol | -0.252 | -0.852 |
| AJ | 0.41 | -0.069 |
| Bibs02 | -0.701 | -2.448 |
| Bibs02c | -1.502 | -2.145 |
| BL6 | 0.977 | 0.468 |
| BL6a | -0.583 | 0.367 |
| BXD01 | 0.775 | 0.16 |
| BXD010 | 1.185 | 0.019 |
| BXD011 | 0.734 | 0.502 |
| BXD03 | 0.627 | 0.0 |
| BXD04 | 2.103 | 1.095 |
| BXD05 | 0.185 | 0.112 |
| BXD06 | 0.405 | 0.43 |
| BXD07 | 0.318 | 0.323 |
| BXD08 | 0.712 | 0.181 |
| BXD09 | 0.286 | 0.541 |
| CAST | -1.081 | -1.355 |
| CCcont | 1.038 | 0.633 |
| DS01 | -0.465 | -0.9 |
| DS02 | -0.833 | -1.512 |
| DS04 | -0.835 | -1.405 |
| DS0c | -1.884 | -0.53 |
| GP01 | -0.722 | 0.437 |
| GP02 | 0.988 | 0.914 |
| GP0c | -0.763 | 0.363 |
| NOD | 0.947 | -0.099 |
| NZO | 0.341 | -0.487 |
| PWK | -0.013 | -0.179 |
| H37Rv_KO_CtpC | 0.635 | -0.2 |
| H37Rv_KO_CtpD | -1.138 | -1.116 |
| H37Rv_KO_Rv1272 | 0.508 | 0.192 |
| H37Rv_KO_SugABC | -1.429 | 0.0 |
| H37Rv_KO_MbtN | -0.172 | 0.204 |
| Trans05 | 0.578 | 0.732 |
| macrophage_unactivated | 0.537 | -0.628 |
| IL1 | -0.664 | 0.549 |
| Rapamycin | 0.163 | -0.865 |
| Tcell | 0.202 | -0.521 |
| GMCSF | -0.246 | -1.056 |
| IFNab | -0.774 | -0.484 |
| IFNg | -0.406 | 0.412 |
| IFNg_GMCSF1 | -1.42 | 0.418 |
| Rv1432_day32 | 0.176 | -0.038 |
| Rv1565c_day32 | 0.366 | -0.877 |
| secA2_input | 0.297 | -1.047 |
| delta_Rv3594 | -0.19 | 0.278 |
| delta_Rv3717 | 0.496 | 0.131 |
| delta_Rv3811 | -0.747 | 0.271 |
| delta_Rv0954 | -0.247 | -0.961 |
| PonA1 | 0.864 | 0.073 |
| EccD1_KO | 0.303 | -0.135 |
| EspI_KO | -0.804 | -1.842 |
| PE35_KO | 0.096 | -0.12 |
| PPE68_KO | 1.062 | 0.25 |
| glycerol2 | 0.137 | -0.21 |
| lignocerate | -0.029 | -0.079 |
| oleate | 0.306 | -0.068 |
| phosphatidylcholine | 0.214 | -0.261 |
| acetate | -0.374 | -0.221 |
| glucAc | -0.665 | -0.05 |
| Rv0950ko | 1.475 | -0.537 |
| Rv1096ko | 0.639 | 1.436 |
| Rv3684ko | -0.111 | 1.041 |
| delta_otsA_trehalose | -0.164 | 0.376 |