Top 10 genes with highest correlation to Rv3681c/whiB4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0906/- | (cc=0.5966) | info on Rv0906/- |
| Rv0488/- | (cc=0.5095) | info on Rv0488/- |
| Rv0933/pstB | (cc=0.4911) | info on Rv0933/pstB |
| Rv3786c/- | (cc=0.4854) | info on Rv3786c/- |
| Rv0688/- | (cc=0.4722) | info on Rv0688/- |
| Rv0492A/- | (cc=0.4705) | info on Rv0492A/- |
| Rv3282/- | (cc=0.46) | info on Rv3282/- |
| Rv0278c/PE_PGRS3 | (cc=0.4591) | info on Rv0278c/PE_PGRS3 |
| Rv0609/vapC28 | (cc=0.4481) | info on Rv0609/vapC28 |
| Rv3096/- | (cc=0.4465) | info on Rv3096/- |
Correlation of Rv3681c/whiB4 with Rv0906/-
Normalized LFCs for Rv3681c/whiB4:
(description and provenance of datasets)
| Rv3681c/whiB4 | Rv0906/- | |
| Fe_supp_jason_reseq | 1.312 | -0.122 |
| low_pH_jason_reseq | -0.467 | -0.447 |
| NO_jason_reseq | -0.27 | 0.05 |
| B6_jason_reseq | 0.012 | 0.776 |
| MHCII_jason_reseq | 0.812 | 1.057 |
| Isoniazid02 | -0.732 | -3.102 |
| Rifampicin4 | 0.449 | 0.433 |
| Ethambutol3 | -0.207 | -2.783 |
| Meropenem3 | 0.156 | -1.412 |
| Vancomycin16 | -0.109 | -0.836 |
| Rv2680_day32 | -1.094 | -1.398 |
| H37Rv_KO_MarP | 0.649 | 0.48 |
| hypoxia_3wks | 0.04 | -0.371 |
| hypoxia_6wks | -0.15 | 0.027 |
| glycerol | -0.028 | -0.176 |
| cholesterol | 0.644 | -0.171 |
| AJ | 0.403 | -0.185 |
| Bibs02 | 0.514 | 0.261 |
| Bibs02c | 0.015 | 0.54 |
| BL6 | 1.024 | -0.728 |
| BL6a | 0.055 | -0.641 |
| BXD01 | -0.476 | -0.511 |
| BXD010 | -0.533 | -0.584 |
| BXD011 | -0.571 | -0.308 |
| BXD03 | 0.499 | -0.753 |
| BXD04 | -0.157 | -0.146 |
| BXD05 | -0.138 | -0.734 |
| BXD06 | -0.599 | -0.552 |
| BXD07 | 0.531 | -0.573 |
| BXD08 | -0.2 | 0.01 |
| BXD09 | -0.33 | -0.999 |
| CAST | 0.08 | -0.272 |
| CCcont | 0.904 | -0.648 |
| DS01 | 1.157 | 0.748 |
| DS02 | 1.385 | 0.271 |
| DS04 | 2.209 | 0.978 |
| DS0c | 1.697 | 0.773 |
| GP01 | -0.722 | -0.832 |
| GP02 | -1.285 | -0.484 |
| GP0c | -0.317 | -0.51 |
| NOD | -0.096 | -0.882 |
| NZO | -0.79 | -0.071 |
| PWK | 0.742 | -0.915 |
| H37Rv_KO_CtpC | -0.312 | -1.154 |
| H37Rv_KO_CtpD | -0.667 | -0.768 |
| H37Rv_KO_Rv1272 | 0.608 | -0.908 |
| H37Rv_KO_SugABC | 1.89 | 0.718 |
| H37Rv_KO_MbtN | -1.364 | -1.808 |
| Trans05 | 0.295 | -0.667 |
| macrophage_unactivated | 0.022 | 0.322 |
| IL1 | -1.13 | 0.0 |
| Rapamycin | -0.356 | -0.948 |
| Tcell | -0.762 | 0.042 |
| GMCSF | -0.264 | -1.373 |
| IFNab | -0.732 | -0.29 |
| IFNg | -0.04 | -0.695 |
| IFNg_GMCSF1 | 0.069 | -0.126 |
| Rv1432_day32 | 0.176 | 0.091 |
| Rv1565c_day32 | -1.445 | -2.147 |
| secA2_input | -0.175 | 0.686 |
| delta_Rv3594 | -0.165 | -0.154 |
| delta_Rv3717 | -1.153 | -0.223 |
| delta_Rv3811 | -0.29 | -0.311 |
| delta_Rv0954 | 0.584 | 0.342 |
| PonA1 | 0.242 | -1.002 |
| EccD1_KO | 0.474 | -0.059 |
| EspI_KO | 0.254 | 0.342 |
| PE35_KO | -1.146 | -0.735 |
| PPE68_KO | 0.0 | -0.234 |
| glycerol2 | 1.042 | 0.629 |
| lignocerate | 1.455 | 1.801 |
| oleate | 0.096 | 0.115 |
| phosphatidylcholine | 1.196 | 0.845 |
| acetate | 1.802 | 1.616 |
| glucAc | 0.669 | 1.629 |
| Rv0950ko | 0.332 | 0.075 |
| Rv1096ko | 0.811 | 1.912 |
| Rv3684ko | 0.829 | 0.681 |
| delta_otsA_trehalose | -1.201 | -1.112 |