Top 10 genes with highest correlation to Rv3678A/-:
none
Correlation of Rv3678A/- with Rv3678A/-
Normalized LFCs for Rv3678A/-:
(description and provenance of datasets)
| Rv3678A/- | Rv3678A/- | |
| Fe_supp_jason_reseq | -1.163 | -1.163 |
| low_pH_jason_reseq | -0.089 | -0.089 |
| NO_jason_reseq | -5.665 | -5.665 |
| B6_jason_reseq | -2.855 | -2.855 |
| MHCII_jason_reseq | -0.858 | -0.858 |
| Isoniazid02 | 0.533 | 0.533 |
| Rifampicin4 | 0.333 | 0.333 |
| Ethambutol3 | 0.15 | 0.15 |
| Meropenem3 | -0.589 | -0.589 |
| Vancomycin16 | 0.287 | 0.287 |
| Rv2680_day32 | -0.194 | -0.194 |
| H37Rv_KO_MarP | -0.574 | -0.574 |
| hypoxia_3wks | -0.459 | -0.459 |
| hypoxia_6wks | 0.37 | 0.37 |
| glycerol | 0.705 | 0.705 |
| cholesterol | -1.475 | -1.475 |
| AJ | -3.506 | -3.506 |
| Bibs02 | -3.486 | -3.486 |
| Bibs02c | -2.474 | -2.474 |
| BL6 | -0.586 | -0.586 |
| BL6a | -2.108 | -2.108 |
| BXD01 | -3.322 | -3.322 |
| BXD010 | -0.877 | -0.877 |
| BXD011 | -1.723 | -1.723 |
| BXD03 | -1.627 | -1.627 |
| BXD04 | -1.133 | -1.133 |
| BXD05 | -1.108 | -1.108 |
| BXD06 | -1.889 | -1.889 |
| BXD07 | -2.612 | -2.612 |
| BXD08 | -1.155 | -1.155 |
| BXD09 | -1.168 | -1.168 |
| CAST | -2.898 | -2.898 |
| CCcont | -0.072 | -0.072 |
| DS01 | -2.342 | -2.342 |
| DS02 | -1.3 | -1.3 |
| DS04 | -1.292 | -1.292 |
| DS0c | 0.058 | 0.058 |
| GP01 | -1.209 | -1.209 |
| GP02 | -2.383 | -2.383 |
| GP0c | -1.807 | -1.807 |
| NOD | -3.632 | -3.632 |
| NZO | -2.218 | -2.218 |
| PWK | -3.7 | -3.7 |
| H37Rv_KO_CtpC | -1.655 | -1.655 |
| H37Rv_KO_CtpD | -2.85 | -2.85 |
| H37Rv_KO_Rv1272 | -2.303 | -2.303 |
| H37Rv_KO_SugABC | -0.273 | -0.273 |
| H37Rv_KO_MbtN | -0.322 | -0.322 |
| Trans05 | -3.283 | -3.283 |
| macrophage_unactivated | 0.082 | 0.082 |
| IL1 | 0.522 | 0.522 |
| Rapamycin | 0.249 | 0.249 |
| Tcell | 0.609 | 0.609 |
| GMCSF | -0.586 | -0.586 |
| IFNab | 0.732 | 0.732 |
| IFNg | -0.593 | -0.593 |
| IFNg_GMCSF1 | -0.49 | -0.49 |
| Rv1432_day32 | 0.812 | 0.812 |
| Rv1565c_day32 | -3.84 | -3.84 |
| secA2_input | -3.383 | -3.383 |
| delta_Rv3594 | -1.465 | -1.465 |
| delta_Rv3717 | -1.842 | -1.842 |
| delta_Rv3811 | -1.13 | -1.13 |
| delta_Rv0954 | 2.102 | 2.102 |
| PonA1 | 1.303 | 1.303 |
| EccD1_KO | -2.917 | -2.917 |
| EspI_KO | -3.545 | -3.545 |
| PE35_KO | -1.864 | -1.864 |
| PPE68_KO | -1.712 | -1.712 |
| glycerol2 | 1.627 | 1.627 |
| lignocerate | 1.383 | 1.383 |
| oleate | 0.057 | 0.057 |
| phosphatidylcholine | 1.252 | 1.252 |
| acetate | 1.132 | 1.132 |
| glucAc | 0.557 | 0.557 |
| Rv0950ko | -1.719 | -1.719 |
| Rv1096ko | -3.26 | -3.26 |
| Rv3684ko | -2.532 | -2.532 |
| delta_otsA_trehalose | 2.912 | 2.912 |