Top 10 genes with highest correlation to Rv3635/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1736c/narX | (cc=0.5754) | info on Rv1736c/narX |
| Rv1291c/- | (cc=0.5603) | info on Rv1291c/- |
| Rv0218/- | (cc=0.5586) | info on Rv0218/- |
| Rv2831/echA16 | (cc=0.5282) | info on Rv2831/echA16 |
| Rv0377/- | (cc=0.5281) | info on Rv0377/- |
| Rv1716/- | (cc=0.5275) | info on Rv1716/- |
| Rv0233/nrdB | (cc=0.5156) | info on Rv0233/nrdB |
| Rv2385/mbtJ | (cc=0.5147) | info on Rv2385/mbtJ |
| Rv1775/- | (cc=0.5049) | info on Rv1775/- |
| Rv0433/- | (cc=0.4957) | info on Rv0433/- |
Correlation of Rv3635/- with Rv1736c/narX
Normalized LFCs for Rv3635/-:
(description and provenance of datasets)
| Rv3635/- | Rv1736c/narX | |
| Fe_supp_jason_reseq | 0.442 | -0.802 |
| low_pH_jason_reseq | 0.167 | -0.196 |
| NO_jason_reseq | 0.507 | -0.244 |
| B6_jason_reseq | 0.311 | 0.903 |
| MHCII_jason_reseq | 0.926 | 1.098 |
| Isoniazid02 | 0.0 | 0.327 |
| Rifampicin4 | 0.0 | -0.168 |
| Ethambutol3 | 0.168 | 0.465 |
| Meropenem3 | 0.165 | 0.14 |
| Vancomycin16 | 0.0 | -0.082 |
| Rv2680_day32 | 0.0 | -0.104 |
| H37Rv_KO_MarP | -0.162 | -0.55 |
| hypoxia_3wks | 0.0 | -0.307 |
| hypoxia_6wks | -0.43 | -0.666 |
| glycerol | 0.086 | 0.151 |
| cholesterol | -0.203 | -0.154 |
| AJ | -0.698 | 0.044 |
| Bibs02 | -1.031 | -0.136 |
| Bibs02c | 0.414 | 0.327 |
| BL6 | -1.144 | -1.479 |
| BL6a | -0.377 | -0.555 |
| BXD01 | -1.062 | -1.376 |
| BXD010 | -0.629 | -0.816 |
| BXD011 | -1.039 | -0.692 |
| BXD03 | -1.237 | -1.244 |
| BXD04 | -0.896 | -1.002 |
| BXD05 | -0.863 | -0.764 |
| BXD06 | -0.967 | -1.228 |
| BXD07 | -1.003 | -0.846 |
| BXD08 | -0.75 | -1.271 |
| BXD09 | -1.018 | -1.412 |
| CAST | 0.284 | -0.704 |
| CCcont | -1.366 | -2.033 |
| DS01 | -0.45 | -0.104 |
| DS02 | -0.304 | 0.321 |
| DS04 | -0.271 | -0.259 |
| DS0c | 0.0 | -0.096 |
| GP01 | -0.633 | -0.354 |
| GP02 | -0.761 | 0.318 |
| GP0c | -1.19 | -0.75 |
| NOD | -0.428 | -0.504 |
| NZO | -0.6 | -0.234 |
| PWK | -0.706 | -0.097 |
| H37Rv_KO_CtpC | -1.041 | -1.316 |
| H37Rv_KO_CtpD | -0.622 | -1.77 |
| H37Rv_KO_Rv1272 | 0.469 | -0.766 |
| H37Rv_KO_SugABC | -0.906 | -2.014 |
| H37Rv_KO_MbtN | -0.437 | -0.384 |
| Trans05 | -1.195 | -0.349 |
| macrophage_unactivated | -0.83 | -0.764 |
| IL1 | -0.374 | -0.451 |
| Rapamycin | -0.807 | 0.196 |
| Tcell | -0.411 | -0.401 |
| GMCSF | -0.694 | -0.069 |
| IFNab | -0.795 | -0.547 |
| IFNg | -0.337 | -0.818 |
| IFNg_GMCSF1 | 0.0 | 0.355 |
| Rv1432_day32 | -0.884 | -0.554 |
| Rv1565c_day32 | 1.339 | 1.025 |
| secA2_input | -1.943 | -0.856 |
| delta_Rv3594 | 0.828 | 0.22 |
| delta_Rv3717 | 0.0 | 0.0 |
| delta_Rv3811 | -0.205 | 0.617 |
| delta_Rv0954 | -0.178 | 0.186 |
| PonA1 | 0.624 | -0.152 |
| EccD1_KO | -0.816 | -0.092 |
| EspI_KO | -1.258 | -0.374 |
| PE35_KO | -0.723 | 0.236 |
| PPE68_KO | -0.793 | -0.227 |
| glycerol2 | -1.208 | -0.685 |
| lignocerate | -1.218 | -0.312 |
| oleate | -0.588 | -0.554 |
| phosphatidylcholine | -1.032 | -0.27 |
| acetate | -1.433 | -0.321 |
| glucAc | -1.034 | -0.31 |
| Rv0950ko | -0.582 | 0.259 |
| Rv1096ko | -0.28 | 0.461 |
| Rv3684ko | 0.285 | 0.0 |
| delta_otsA_trehalose | 0.0 | 0.371 |