Top 10 genes with highest correlation to Rv3565/aspB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2737A/- | (cc=0.5185) | info on Rv2737A/- |
| Rv3489/- | (cc=0.5088) | info on Rv3489/- |
| Rv0380c/- | (cc=0.45) | info on Rv0380c/- |
| Rv0364/- | (cc=0.4441) | info on Rv0364/- |
| Rv3690/- | (cc=0.4323) | info on Rv3690/- |
| Rv2882c/frr | (cc=0.432) | info on Rv2882c/frr |
| Rv0587/yrbE2A | (cc=0.4289) | info on Rv0587/yrbE2A |
| Rv0781/ptrBa | (cc=0.4261) | info on Rv0781/ptrBa |
| Rv3658c/- | (cc=0.4249) | info on Rv3658c/- |
| Rv3363c/- | (cc=0.4169) | info on Rv3363c/- |
Correlation of Rv3565/aspB with Rv2737A/-
Normalized LFCs for Rv3565/aspB:
(description and provenance of datasets)
| Rv3565/aspB | Rv2737A/- | |
| Fe_supp_jason_reseq | 0.319 | 1.558 |
| low_pH_jason_reseq | 0.231 | -1.022 |
| NO_jason_reseq | 0.53 | -0.845 |
| B6_jason_reseq | -0.689 | -1.139 |
| MHCII_jason_reseq | 0.257 | 0.829 |
| Isoniazid02 | 0.201 | -0.851 |
| Rifampicin4 | 0.374 | -0.46 |
| Ethambutol3 | 0.168 | -0.1 |
| Meropenem3 | 0.315 | -0.435 |
| Vancomycin16 | 0.698 | -0.218 |
| Rv2680_day32 | 1.252 | 0.0 |
| H37Rv_KO_MarP | -0.083 | 1.111 |
| hypoxia_3wks | 0.459 | -0.506 |
| hypoxia_6wks | -0.127 | -0.881 |
| glycerol | 0.66 | 0.0 |
| cholesterol | 0.833 | -0.557 |
| AJ | -0.255 | 0.541 |
| Bibs02 | 0.858 | 0.305 |
| Bibs02c | -0.58 | -0.317 |
| BL6 | 1.574 | 1.501 |
| BL6a | 0.0 | 0.644 |
| BXD01 | 0.426 | 0.653 |
| BXD010 | 0.418 | 2.063 |
| BXD011 | 0.0 | 1.113 |
| BXD03 | 1.003 | 1.98 |
| BXD04 | -0.524 | 1.133 |
| BXD05 | 0.046 | 1.373 |
| BXD06 | 0.627 | 0.98 |
| BXD07 | 0.521 | 0.793 |
| BXD08 | 1.602 | 1.241 |
| BXD09 | 0.347 | 1.357 |
| CAST | 0.439 | -0.632 |
| CCcont | 0.328 | 1.225 |
| DS01 | 0.45 | 0.27 |
| DS02 | 0.285 | -1.955 |
| DS04 | -0.628 | -1.938 |
| DS0c | 0.919 | 0.286 |
| GP01 | -0.649 | -1.702 |
| GP02 | -0.955 | -1.434 |
| GP0c | -0.854 | -2.241 |
| NOD | -0.838 | -0.392 |
| NZO | -0.144 | -0.496 |
| PWK | 0.831 | 0.934 |
| H37Rv_KO_CtpC | -0.118 | 1.193 |
| H37Rv_KO_CtpD | -0.832 | -1.405 |
| H37Rv_KO_Rv1272 | 0.31 | -2.289 |
| H37Rv_KO_SugABC | -1.038 | -1.608 |
| H37Rv_KO_MbtN | -0.9 | -0.832 |
| Trans05 | -0.487 | -2.121 |
| macrophage_unactivated | 2.273 | -0.732 |
| IL1 | 1.649 | 1.189 |
| Rapamycin | 0.829 | 1.863 |
| Tcell | 1.105 | 1.166 |
| GMCSF | 0.618 | 2.994 |
| IFNab | 1.125 | 1.439 |
| IFNg | 0.428 | 2.037 |
| IFNg_GMCSF1 | 0.383 | 1.621 |
| Rv1432_day32 | 0.0 | 0.18 |
| Rv1565c_day32 | -0.147 | 0.218 |
| secA2_input | -0.348 | 0.161 |
| delta_Rv3594 | 0.22 | 0.675 |
| delta_Rv3717 | -0.201 | 0.555 |
| delta_Rv3811 | -0.116 | 0.0 |
| delta_Rv0954 | 0.0 | -3.211 |
| PonA1 | -0.394 | -2.565 |
| EccD1_KO | -1.283 | -2.042 |
| EspI_KO | -1.112 | -2.852 |
| PE35_KO | -1.438 | -3.267 |
| PPE68_KO | -1.248 | -1.389 |
| glycerol2 | -1.184 | -1.234 |
| lignocerate | -0.587 | -1.013 |
| oleate | -0.961 | 0.204 |
| phosphatidylcholine | -1.063 | -0.849 |
| acetate | -1.453 | 0.585 |
| glucAc | -0.814 | -0.786 |
| Rv0950ko | 1.007 | -0.28 |
| Rv1096ko | 1.155 | 1.113 |
| Rv3684ko | 1.706 | 0.727 |
| delta_otsA_trehalose | 0.517 | -1.948 |