Top 10 genes with highest correlation to Rv3450c/eccB4:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0237/lpqI | (cc=0.57) | info on Rv0237/lpqI |
| Rv0071/- | (cc=0.5688) | info on Rv0071/- |
| Rv0536/galE3 | (cc=0.5348) | info on Rv0536/galE3 |
| Rv3707c/- | (cc=0.5301) | info on Rv3707c/- |
| Rv0470A/- | (cc=0.5278) | info on Rv0470A/- |
| Rv0613c/- | (cc=0.5008) | info on Rv0613c/- |
| Rv0918/- | (cc=0.5004) | info on Rv0918/- |
| Rv0271c/fadE6 | (cc=0.4937) | info on Rv0271c/fadE6 |
| Rv0139/- | (cc=0.4927) | info on Rv0139/- |
| Rv2636/- | (cc=0.4898) | info on Rv2636/- |
Correlation of Rv3450c/eccB4 with Rv0237/lpqI
Normalized LFCs for Rv3450c/eccB4:
(description and provenance of datasets)
| Rv3450c/eccB4 | Rv0237/lpqI | |
| Fe_supp_jason_reseq | -0.294 | 0.87 |
| low_pH_jason_reseq | -0.761 | 1.166 |
| NO_jason_reseq | -0.572 | -3.187 |
| B6_jason_reseq | 0.09 | -0.303 |
| MHCII_jason_reseq | 0.893 | 1.499 |
| Isoniazid02 | 1.145 | -0.34 |
| Rifampicin4 | 1.099 | 1.026 |
| Ethambutol3 | 1.439 | 0.461 |
| Meropenem3 | -0.364 | 0.138 |
| Vancomycin16 | 0.077 | -0.775 |
| Rv2680_day32 | 2.022 | 1.358 |
| H37Rv_KO_MarP | 0.628 | -0.265 |
| hypoxia_3wks | 0.128 | 0.295 |
| hypoxia_6wks | -0.599 | 0.155 |
| glycerol | 0.813 | -0.923 |
| cholesterol | 0.263 | -0.019 |
| AJ | 0.225 | 0.15 |
| Bibs02 | 0.646 | 0.162 |
| Bibs02c | 0.793 | 0.703 |
| BL6 | -0.716 | -0.796 |
| BL6a | 0.64 | 0.27 |
| BXD01 | -0.257 | -0.287 |
| BXD010 | -0.786 | -1.54 |
| BXD011 | -0.567 | -0.388 |
| BXD03 | -0.66 | -1.806 |
| BXD04 | 0.024 | -0.816 |
| BXD05 | -0.31 | -1.41 |
| BXD06 | -0.719 | -1.135 |
| BXD07 | -0.374 | -0.985 |
| BXD08 | -0.231 | -0.782 |
| BXD09 | -0.459 | -1.075 |
| CAST | 0.14 | -0.432 |
| CCcont | -0.191 | -0.123 |
| DS01 | 0.666 | -0.195 |
| DS02 | 0.594 | 0.37 |
| DS04 | 0.422 | -2.032 |
| DS0c | 1.259 | 1.265 |
| GP01 | 0.045 | -1.147 |
| GP02 | 0.06 | -1.569 |
| GP0c | -0.834 | -0.995 |
| NOD | 0.225 | 1.642 |
| NZO | -0.247 | -1.884 |
| PWK | 0.232 | 0.026 |
| H37Rv_KO_CtpC | -0.844 | -0.385 |
| H37Rv_KO_CtpD | -0.035 | -0.934 |
| H37Rv_KO_Rv1272 | -0.76 | -0.797 |
| H37Rv_KO_SugABC | 0.078 | 0.191 |
| H37Rv_KO_MbtN | -0.902 | -1.283 |
| Trans05 | -0.82 | -0.681 |
| macrophage_unactivated | -0.347 | 0.271 |
| IL1 | 0.225 | -0.869 |
| Rapamycin | 0.939 | 0.089 |
| Tcell | -0.44 | -0.196 |
| GMCSF | 0.058 | 0.576 |
| IFNab | 0.659 | 0.088 |
| IFNg | -0.631 | -0.16 |
| IFNg_GMCSF1 | 0.035 | 0.27 |
| Rv1432_day32 | -0.284 | 0.0 |
| Rv1565c_day32 | 0.674 | 0.867 |
| secA2_input | 1.243 | 1.702 |
| delta_Rv3594 | -0.367 | -0.477 |
| delta_Rv3717 | -0.15 | -0.311 |
| delta_Rv3811 | -0.104 | -0.165 |
| delta_Rv0954 | -0.481 | 1.053 |
| PonA1 | 0.305 | 0.665 |
| EccD1_KO | -0.921 | -1.829 |
| EspI_KO | -1.32 | -1.985 |
| PE35_KO | -0.901 | -1.916 |
| PPE68_KO | -1.203 | -2.582 |
| glycerol2 | -0.01 | -0.219 |
| lignocerate | 0.337 | -0.712 |
| oleate | 0.238 | -0.583 |
| phosphatidylcholine | 0.472 | -0.359 |
| acetate | -0.14 | 0.271 |
| glucAc | -0.171 | -0.026 |
| Rv0950ko | -0.109 | 0.175 |
| Rv1096ko | 0.311 | -0.323 |
| Rv3684ko | -0.029 | -0.508 |
| delta_otsA_trehalose | 0.364 | 0.388 |