Top 10 genes with highest correlation to Rv3382c/lytB1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2430c/PPE41 | (cc=0.6241) | info on Rv2430c/PPE41 |
| Rv0822c/- | (cc=0.5973) | info on Rv0822c/- |
| Rv1918c/PPE35 | (cc=0.597) | info on Rv1918c/PPE35 |
| Rv1059/- | (cc=0.5915) | info on Rv1059/- |
| Rv0305c/PPE6 | (cc=0.584) | info on Rv0305c/PPE6 |
| Rv2543/lppA | (cc=0.5555) | info on Rv2543/lppA |
| Rv3142c/- | (cc=0.5496) | info on Rv3142c/- |
| Rv2929/- | (cc=0.5489) | info on Rv2929/- |
| Rv1616/- | (cc=0.5473) | info on Rv1616/- |
| Rv1505c/- | (cc=0.5434) | info on Rv1505c/- |
Correlation of Rv3382c/lytB1 with Rv2430c/PPE41
Normalized LFCs for Rv3382c/lytB1:
(description and provenance of datasets)
| Rv3382c/lytB1 | Rv2430c/PPE41 | |
| Fe_supp_jason_reseq | -0.537 | -0.259 |
| low_pH_jason_reseq | -0.453 | -0.617 |
| NO_jason_reseq | -0.129 | -0.326 |
| B6_jason_reseq | -0.782 | -0.565 |
| MHCII_jason_reseq | -0.265 | -1.222 |
| Isoniazid02 | 0.4 | -0.362 |
| Rifampicin4 | -0.027 | -0.379 |
| Ethambutol3 | 0.499 | -0.539 |
| Meropenem3 | 1.751 | 0.604 |
| Vancomycin16 | 0.501 | -0.541 |
| Rv2680_day32 | -2.159 | -0.546 |
| H37Rv_KO_MarP | -0.384 | 0.78 |
| hypoxia_3wks | 0.128 | -0.016 |
| hypoxia_6wks | -0.47 | -0.558 |
| glycerol | 0.531 | -1.482 |
| cholesterol | 0.472 | -0.355 |
| AJ | 0.126 | 1.329 |
| Bibs02 | 1.02 | 0.293 |
| Bibs02c | 1.322 | -0.441 |
| BL6 | 0.745 | 2.014 |
| BL6a | 1.578 | 1.624 |
| BXD01 | 0.16 | 1.73 |
| BXD010 | 0.693 | 2.268 |
| BXD011 | 1.176 | 2.003 |
| BXD03 | 1.089 | 2.085 |
| BXD04 | 0.461 | 2.116 |
| BXD05 | 1.409 | 2.269 |
| BXD06 | 0.929 | 1.836 |
| BXD07 | 0.809 | 1.829 |
| BXD08 | 0.705 | 1.59 |
| BXD09 | 0.93 | 1.891 |
| CAST | 0.719 | 1.024 |
| CCcont | 0.315 | 1.659 |
| DS01 | 0.291 | 1.092 |
| DS02 | 0.507 | 0.558 |
| DS04 | -0.271 | 0.769 |
| DS0c | 0.707 | 0.509 |
| GP01 | -0.347 | 0.134 |
| GP02 | 0.885 | 2.462 |
| GP0c | -0.012 | 0.343 |
| NOD | 1.061 | 1.447 |
| NZO | 0.0 | 0.483 |
| PWK | 0.159 | 0.872 |
| H37Rv_KO_CtpC | 0.595 | 0.914 |
| H37Rv_KO_CtpD | 2.104 | 1.252 |
| H37Rv_KO_Rv1272 | 0.912 | 1.399 |
| H37Rv_KO_SugABC | 0.798 | 1.91 |
| H37Rv_KO_MbtN | 1.1 | 1.129 |
| Trans05 | 1.041 | 2.226 |
| macrophage_unactivated | 0.17 | 1.076 |
| IL1 | 0.089 | 0.125 |
| Rapamycin | 0.798 | 0.19 |
| Tcell | -0.244 | 0.094 |
| GMCSF | 0.422 | 0.636 |
| IFNab | 0.599 | 0.308 |
| IFNg | 0.893 | 0.537 |
| IFNg_GMCSF1 | -0.632 | 0.688 |
| Rv1432_day32 | -0.155 | -0.428 |
| Rv1565c_day32 | 0.785 | 0.782 |
| secA2_input | -1.34 | -0.891 |
| delta_Rv3594 | -0.396 | -0.571 |
| delta_Rv3717 | -1.029 | -1.178 |
| delta_Rv3811 | -0.442 | -0.265 |
| delta_Rv0954 | -0.384 | -1.172 |
| PonA1 | -0.81 | -0.066 |
| EccD1_KO | -1.033 | -0.625 |
| EspI_KO | -0.394 | -0.331 |
| PE35_KO | -0.324 | -0.726 |
| PPE68_KO | -0.646 | -0.701 |
| glycerol2 | -0.671 | -0.084 |
| lignocerate | -0.872 | -0.073 |
| oleate | 0.699 | 0.234 |
| phosphatidylcholine | -0.581 | 0.041 |
| acetate | -0.04 | 0.017 |
| glucAc | -1.299 | -0.627 |
| Rv0950ko | 0.54 | -0.136 |
| Rv1096ko | -0.042 | -0.22 |
| Rv3684ko | -0.285 | -0.508 |
| delta_otsA_trehalose | 0.068 | 1.428 |