Top 10 genes with highest correlation to Rv3362c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2601/speE | (cc=0.5706) | info on Rv2601/speE |
| Rv2125/- | (cc=0.5664) | info on Rv2125/- |
| Rv0621/- | (cc=0.5145) | info on Rv0621/- |
| Rv3078/hab | (cc=0.4822) | info on Rv3078/hab |
| Rv1742/- | (cc=0.4593) | info on Rv1742/- |
| Rv0806c/cpsY | (cc=0.4555) | info on Rv0806c/cpsY |
| Rv3557c/- | (cc=0.454) | info on Rv3557c/- |
| Rv2037c/- | (cc=0.445) | info on Rv2037c/- |
| Rv2787/- | (cc=0.4407) | info on Rv2787/- |
| Rv2138/lppL | (cc=0.4376) | info on Rv2138/lppL |
Correlation of Rv3362c/- with Rv2601/speE
Normalized LFCs for Rv3362c/-:
(description and provenance of datasets)
| Rv3362c/- | Rv2601/speE | |
| Fe_supp_jason_reseq | -0.451 | -0.398 |
| low_pH_jason_reseq | -1.251 | -0.522 |
| NO_jason_reseq | -0.751 | 0.15 |
| B6_jason_reseq | 0.202 | 0.284 |
| MHCII_jason_reseq | 0.178 | 0.663 |
| Isoniazid02 | -0.06 | 0.384 |
| Rifampicin4 | -0.184 | 0.287 |
| Ethambutol3 | 0.285 | -0.243 |
| Meropenem3 | -0.653 | -0.472 |
| Vancomycin16 | -0.451 | 0.037 |
| Rv2680_day32 | -0.351 | 0.286 |
| H37Rv_KO_MarP | 0.595 | -0.097 |
| hypoxia_3wks | -0.08 | 0.163 |
| hypoxia_6wks | 0.313 | -0.633 |
| glycerol | 1.387 | 0.844 |
| cholesterol | 1.34 | 0.196 |
| AJ | 1.106 | 0.521 |
| Bibs02 | 0.026 | 0.139 |
| Bibs02c | -0.332 | 0.009 |
| BL6 | -1.794 | -1.057 |
| BL6a | -1.818 | -0.201 |
| BXD01 | -1.725 | -1.101 |
| BXD010 | -1.538 | -0.962 |
| BXD011 | -1.169 | -1.09 |
| BXD03 | -0.921 | -0.239 |
| BXD04 | -1.226 | -0.753 |
| BXD05 | -0.465 | -0.64 |
| BXD06 | -1.048 | -0.855 |
| BXD07 | -0.943 | -0.799 |
| BXD08 | -1.537 | -0.66 |
| BXD09 | -1.593 | -0.486 |
| CAST | 0.462 | 0.137 |
| CCcont | -1.398 | -1.219 |
| DS01 | -0.354 | 0.303 |
| DS02 | -0.602 | 0.449 |
| DS04 | -0.555 | 0.587 |
| DS0c | 0.448 | 0.057 |
| GP01 | -0.404 | 0.293 |
| GP02 | -1.444 | 0.33 |
| GP0c | -0.229 | -0.32 |
| NOD | 3.811 | 0.851 |
| NZO | -1.358 | -0.394 |
| PWK | -0.379 | 0.051 |
| H37Rv_KO_CtpC | -0.832 | -0.237 |
| H37Rv_KO_CtpD | -0.338 | 0.044 |
| H37Rv_KO_Rv1272 | 1.681 | -0.71 |
| H37Rv_KO_SugABC | 0.931 | 0.0 |
| H37Rv_KO_MbtN | -0.388 | -0.603 |
| Trans05 | -1.51 | -0.468 |
| macrophage_unactivated | 2.124 | 0.0 |
| IL1 | -0.389 | -0.311 |
| Rapamycin | -0.924 | -0.641 |
| Tcell | -1.153 | -0.955 |
| GMCSF | 0.61 | 0.409 |
| IFNab | -1.493 | -0.447 |
| IFNg | 1.692 | -0.235 |
| IFNg_GMCSF1 | 0.066 | 0.217 |
| Rv1432_day32 | 0.0 | -0.061 |
| Rv1565c_day32 | -0.698 | 0.608 |
| secA2_input | 1.722 | -0.131 |
| delta_Rv3594 | 1.53 | 0.408 |
| delta_Rv3717 | 1.53 | 0.424 |
| delta_Rv3811 | 0.294 | 0.192 |
| delta_Rv0954 | 2.048 | 0.907 |
| PonA1 | 1.272 | 0.793 |
| EccD1_KO | -0.918 | 0.082 |
| EspI_KO | 0.667 | 0.394 |
| PE35_KO | 0.312 | 0.073 |
| PPE68_KO | 0.659 | -0.4 |
| glycerol2 | -0.709 | -0.708 |
| lignocerate | -0.725 | -0.675 |
| oleate | -0.56 | -0.457 |
| phosphatidylcholine | -0.749 | -0.346 |
| acetate | 0.163 | -0.76 |
| glucAc | 0.082 | -0.898 |
| Rv0950ko | 0.464 | -0.332 |
| Rv1096ko | -0.356 | -0.416 |
| Rv3684ko | -1.411 | -0.989 |
| delta_otsA_trehalose | 1.004 | -0.097 |