Top 10 genes with highest correlation to Rv3298c/lpqC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2052c/- | (cc=0.523) | info on Rv2052c/- |
| Rv3368c/- | (cc=0.5209) | info on Rv3368c/- |
| Rv0470A/- | (cc=0.5193) | info on Rv0470A/- |
| Rv1271c/- | (cc=0.5074) | info on Rv1271c/- |
| Rv2238c/ahpE | (cc=0.4694) | info on Rv2238c/ahpE |
| Rv3091/- | (cc=0.463) | info on Rv3091/- |
| Rv3534c/hsaF | (cc=0.4533) | info on Rv3534c/hsaF |
| Rv2029c/pfkB | (cc=0.4504) | info on Rv2029c/pfkB |
| Rv1184c/- | (cc=0.4483) | info on Rv1184c/- |
| Rv2237A/- | (cc=0.443) | info on Rv2237A/- |
Correlation of Rv3298c/lpqC with Rv2052c/-
Normalized LFCs for Rv3298c/lpqC:
(description and provenance of datasets)
| Rv3298c/lpqC | Rv2052c/- | |
| Fe_supp_jason_reseq | 0.472 | 0.134 |
| low_pH_jason_reseq | -0.052 | 0.142 |
| NO_jason_reseq | 0.785 | 1.457 |
| B6_jason_reseq | 1.309 | 0.384 |
| MHCII_jason_reseq | 0.498 | -0.255 |
| Isoniazid02 | 0.0 | -0.76 |
| Rifampicin4 | 0.092 | -0.119 |
| Ethambutol3 | 0.297 | -0.579 |
| Meropenem3 | 0.041 | -1.181 |
| Vancomycin16 | 0.491 | -0.708 |
| Rv2680_day32 | 0.467 | -1.116 |
| H37Rv_KO_MarP | 0.732 | -0.593 |
| hypoxia_3wks | -0.522 | 0.498 |
| hypoxia_6wks | -0.47 | 0.073 |
| glycerol | -0.316 | -0.038 |
| cholesterol | -0.887 | -0.142 |
| AJ | 0.123 | -0.64 |
| Bibs02 | 0.485 | 0.179 |
| Bibs02c | 0.0 | -0.089 |
| BL6 | -0.227 | -0.623 |
| BL6a | -0.121 | -1.049 |
| BXD01 | -0.406 | -1.368 |
| BXD010 | -0.437 | -0.976 |
| BXD011 | -0.291 | -1.087 |
| BXD03 | -0.502 | -1.169 |
| BXD04 | -0.518 | -0.764 |
| BXD05 | -0.307 | -1.222 |
| BXD06 | -0.658 | -1.623 |
| BXD07 | -0.756 | -1.32 |
| BXD08 | -0.893 | -1.08 |
| BXD09 | -0.834 | -1.607 |
| CAST | -0.075 | -0.514 |
| CCcont | 0.146 | -0.849 |
| DS01 | 0.616 | 0.108 |
| DS02 | 0.465 | 0.02 |
| DS04 | 0.808 | 0.333 |
| DS0c | 0.284 | -0.168 |
| GP01 | -0.273 | -1.037 |
| GP02 | -1.05 | -1.011 |
| GP0c | -0.999 | -1.399 |
| NOD | -0.958 | -1.313 |
| NZO | -0.851 | -1.337 |
| PWK | 0.402 | -0.381 |
| H37Rv_KO_CtpC | -0.603 | 0.379 |
| H37Rv_KO_CtpD | 0.196 | 0.639 |
| H37Rv_KO_Rv1272 | 0.0 | 0.108 |
| H37Rv_KO_SugABC | 0.106 | -0.944 |
| H37Rv_KO_MbtN | 0.629 | -0.177 |
| Trans05 | 0.153 | -0.175 |
| macrophage_unactivated | -0.073 | -0.306 |
| IL1 | 0.676 | 0.816 |
| Rapamycin | 1.05 | 0.218 |
| Tcell | 0.362 | 0.424 |
| GMCSF | 0.739 | 0.539 |
| IFNab | 0.629 | -0.26 |
| IFNg | 0.297 | 0.85 |
| IFNg_GMCSF1 | 0.525 | 0.754 |
| Rv1432_day32 | -0.357 | -1.421 |
| Rv1565c_day32 | 0.191 | -1.194 |
| secA2_input | 1.071 | 0.598 |
| delta_Rv3594 | -0.598 | -0.28 |
| delta_Rv3717 | -0.977 | -0.755 |
| delta_Rv3811 | -1.683 | -0.879 |
| delta_Rv0954 | -0.163 | 0.385 |
| PonA1 | -1.003 | 0.694 |
| EccD1_KO | -0.257 | 0.25 |
| EspI_KO | 0.148 | 0.602 |
| PE35_KO | 0.28 | 0.155 |
| PPE68_KO | -0.224 | -0.058 |
| glycerol2 | -0.098 | -0.391 |
| lignocerate | 0.911 | -0.314 |
| oleate | 0.167 | -0.756 |
| phosphatidylcholine | 0.714 | -0.062 |
| acetate | 0.318 | -0.015 |
| glucAc | 0.538 | -0.143 |
| Rv0950ko | -0.075 | 0.6 |
| Rv1096ko | 0.67 | 0.79 |
| Rv3684ko | -0.193 | -0.098 |
| delta_otsA_trehalose | 0.628 | 1.017 |