Top 10 genes with highest correlation to Rv3242c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3073c/- | (cc=0.5807) | info on Rv3073c/- |
| Rv2236c/cobD | (cc=0.5749) | info on Rv2236c/cobD |
| Rv3038c/- | (cc=0.5047) | info on Rv3038c/- |
| Rv2902c/rnhB | (cc=0.5047) | info on Rv2902c/rnhB |
| Rv0347/- | (cc=0.5017) | info on Rv0347/- |
| Rv0233/nrdB | (cc=0.4991) | info on Rv0233/nrdB |
| Rv1940/ribA1 | (cc=0.4955) | info on Rv1940/ribA1 |
| Rv1736c/narX | (cc=0.4874) | info on Rv1736c/narX |
| Rv3652/PE_PGRS60 | (cc=0.4829) | info on Rv3652/PE_PGRS60 |
| Rv0435c/- | (cc=0.4771) | info on Rv0435c/- |
Correlation of Rv3242c/- with Rv3073c/-
Normalized LFCs for Rv3242c/-:
(description and provenance of datasets)
| Rv3242c/- | Rv3073c/- | |
| Fe_supp_jason_reseq | -1.13 | -1.754 |
| low_pH_jason_reseq | 1.275 | -0.87 |
| NO_jason_reseq | 2.095 | 0.643 |
| B6_jason_reseq | 1.267 | 0.322 |
| MHCII_jason_reseq | -0.18 | -1.012 |
| Isoniazid02 | 1.505 | -0.223 |
| Rifampicin4 | 2.071 | 0.536 |
| Ethambutol3 | 0.618 | 4.925 |
| Meropenem3 | 0.518 | 0.152 |
| Vancomycin16 | 1.658 | 0.239 |
| Rv2680_day32 | 0.459 | -0.119 |
| H37Rv_KO_MarP | 0.545 | -0.093 |
| hypoxia_3wks | 0.929 | -1.447 |
| hypoxia_6wks | 0.931 | -1.222 |
| glycerol | -0.126 | -0.347 |
| cholesterol | 0.901 | -0.386 |
| AJ | 0.541 | 0.0 |
| Bibs02 | 1.111 | -0.563 |
| Bibs02c | -0.538 | 0.029 |
| BL6 | -1.779 | -1.637 |
| BL6a | -1.049 | -0.528 |
| BXD01 | -0.961 | -2.734 |
| BXD010 | -1.606 | -3.574 |
| BXD011 | -0.661 | -2.55 |
| BXD03 | -0.52 | -3.26 |
| BXD04 | -1.497 | -1.454 |
| BXD05 | -1.03 | -3.59 |
| BXD06 | -1.098 | -2.446 |
| BXD07 | -2.486 | -3.277 |
| BXD08 | -0.66 | -2.127 |
| BXD09 | -1.428 | -1.012 |
| CAST | -0.534 | -0.432 |
| CCcont | -1.518 | -3.036 |
| DS01 | -0.08 | -0.055 |
| DS02 | 1.09 | -1.155 |
| DS04 | 0.334 | -1.001 |
| DS0c | -0.119 | -0.248 |
| GP01 | -0.38 | -1.056 |
| GP02 | 2.192 | 0.438 |
| GP0c | -0.538 | 0.545 |
| NOD | -0.841 | -1.227 |
| NZO | -0.316 | -0.663 |
| PWK | 0.629 | -1.178 |
| H37Rv_KO_CtpC | -1.679 | 0.695 |
| H37Rv_KO_CtpD | -2.534 | -3.62 |
| H37Rv_KO_Rv1272 | -3.267 | -3.682 |
| H37Rv_KO_SugABC | -2.126 | -2.302 |
| H37Rv_KO_MbtN | -2.763 | -2.395 |
| Trans05 | -2.163 | -1.365 |
| macrophage_unactivated | 0.057 | -1.348 |
| IL1 | -2.011 | -0.928 |
| Rapamycin | -0.055 | 0.835 |
| Tcell | -1.124 | -0.358 |
| GMCSF | 0.185 | -0.391 |
| IFNab | 1.545 | 0.822 |
| IFNg | -1.109 | -1.684 |
| IFNg_GMCSF1 | -0.943 | -0.346 |
| Rv1432_day32 | -0.048 | 0.0 |
| Rv1565c_day32 | 0.128 | 0.0 |
| secA2_input | -1.545 | -0.415 |
| delta_Rv3594 | -1.164 | -2.842 |
| delta_Rv3717 | -0.812 | -1.845 |
| delta_Rv3811 | -1.318 | -1.487 |
| delta_Rv0954 | 0.385 | -0.646 |
| PonA1 | 0.694 | 0.461 |
| EccD1_KO | -0.99 | -0.77 |
| EspI_KO | -0.297 | -1.469 |
| PE35_KO | -1.482 | -0.875 |
| PPE68_KO | -1.894 | -2.454 |
| glycerol2 | -2.133 | -1.827 |
| lignocerate | -1.969 | -1.644 |
| oleate | 0.398 | -0.936 |
| phosphatidylcholine | -2.786 | -1.23 |
| acetate | -1.985 | -3.548 |
| glucAc | -2.014 | -2.382 |
| Rv0950ko | 1.161 | 0.103 |
| Rv1096ko | 1.426 | -2.621 |
| Rv3684ko | 0.282 | -1.284 |
| delta_otsA_trehalose | 0.766 | 0.126 |