Top 10 genes with highest correlation to Rv3236c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3100c/smpB | (cc=0.4631) | info on Rv3100c/smpB |
| Rv0327c/cyp135A1 | (cc=0.458) | info on Rv0327c/cyp135A1 |
| Rv2467/pepN | (cc=0.4411) | info on Rv2467/pepN |
| Rv2091c/- | (cc=0.4384) | info on Rv2091c/- |
| Rv3605c/- | (cc=0.4348) | info on Rv3605c/- |
| Rv2140c/TB18.6 | (cc=0.4305) | info on Rv2140c/TB18.6 |
| Rv3058c/- | (cc=0.4281) | info on Rv3058c/- |
| Rv1038c/esxJ | (cc=0.4256) | info on Rv1038c/esxJ |
| Rv1841c/- | (cc=0.4217) | info on Rv1841c/- |
| Rv1331/- | (cc=0.4172) | info on Rv1331/- |
Correlation of Rv3236c/- with Rv3100c/smpB
Normalized LFCs for Rv3236c/-:
(description and provenance of datasets)
| Rv3236c/- | Rv3100c/smpB | |
| Fe_supp_jason_reseq | -0.227 | 0.38 |
| low_pH_jason_reseq | -0.125 | -0.231 |
| NO_jason_reseq | -0.567 | -0.362 |
| B6_jason_reseq | 0.523 | 3.094 |
| MHCII_jason_reseq | 0.669 | 0.0 |
| Isoniazid02 | -0.808 | -0.851 |
| Rifampicin4 | -0.341 | 0.252 |
| Ethambutol3 | -0.401 | 0.966 |
| Meropenem3 | -0.477 | -0.386 |
| Vancomycin16 | -0.926 | 0.48 |
| Rv2680_day32 | -0.691 | 0.0 |
| H37Rv_KO_MarP | -0.023 | 0.0 |
| hypoxia_3wks | -0.901 | -2.333 |
| hypoxia_6wks | -3.443 | -0.637 |
| glycerol | 0.018 | -0.459 |
| cholesterol | -0.08 | -2.31 |
| AJ | 0.103 | 1.859 |
| Bibs02 | 0.778 | 0.747 |
| Bibs02c | 0.289 | 0.58 |
| BL6 | -0.878 | -1.87 |
| BL6a | 0.0 | 0.214 |
| BXD01 | -1.657 | -1.947 |
| BXD010 | -1.288 | -0.187 |
| BXD011 | -1.251 | -2.032 |
| BXD03 | -0.69 | -2.022 |
| BXD04 | -0.696 | -1.973 |
| BXD05 | -1.081 | -2.012 |
| BXD06 | -1.39 | -2.129 |
| BXD07 | -1.196 | -1.829 |
| BXD08 | -1.539 | -1.868 |
| BXD09 | -1.037 | -2.242 |
| CAST | -0.594 | -0.657 |
| CCcont | -0.42 | -2.098 |
| DS01 | -1.365 | -0.974 |
| DS02 | -1.527 | 0.889 |
| DS04 | -1.362 | -2.412 |
| DS0c | -0.896 | -0.685 |
| GP01 | -1.129 | -1.304 |
| GP02 | 0.96 | -1.327 |
| GP0c | -0.572 | -2.074 |
| NOD | -0.324 | -0.449 |
| NZO | -0.621 | 0.688 |
| PWK | -0.071 | -0.045 |
| H37Rv_KO_CtpC | -0.84 | -2.282 |
| H37Rv_KO_CtpD | -0.618 | -1.398 |
| H37Rv_KO_Rv1272 | -1.015 | -2.25 |
| H37Rv_KO_SugABC | -2.157 | -1.481 |
| H37Rv_KO_MbtN | -1.327 | -1.541 |
| Trans05 | -0.716 | -2.084 |
| macrophage_unactivated | -0.379 | 0.0 |
| IL1 | -0.356 | 0.0 |
| Rapamycin | -0.107 | 0.0 |
| Tcell | 0.147 | 1.58 |
| GMCSF | 0.459 | 0.0 |
| IFNab | -0.07 | 3.44 |
| IFNg | 0.353 | 0.0 |
| IFNg_GMCSF1 | 0.449 | 0.434 |
| Rv1432_day32 | -1.356 | 0.0 |
| Rv1565c_day32 | -0.058 | 0.0 |
| secA2_input | 0.293 | 0.593 |
| delta_Rv3594 | -0.078 | -1.416 |
| delta_Rv3717 | -0.227 | 1.305 |
| delta_Rv3811 | -0.754 | -1.172 |
| delta_Rv0954 | -0.432 | -1.196 |
| PonA1 | -0.343 | 1.24 |
| EccD1_KO | 0.5 | 1.194 |
| EspI_KO | 0.054 | -0.305 |
| PE35_KO | -0.085 | 0.292 |
| PPE68_KO | 0.378 | 0.0 |
| glycerol2 | 1.551 | 0.193 |
| lignocerate | -2.761 | 0.0 |
| oleate | -1.045 | 0.0 |
| phosphatidylcholine | 1.737 | 0.0 |
| acetate | 0.846 | 0.0 |
| glucAc | 0.485 | 0.0 |
| Rv0950ko | 0.85 | 2.087 |
| Rv1096ko | 0.446 | 2.844 |
| Rv3684ko | 0.694 | 0.675 |
| delta_otsA_trehalose | -0.048 | 0.0 |