Top 10 genes with highest correlation to Rv3076/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3092c/- | (cc=0.4927) | info on Rv3092c/- |
| Rv1046c/- | (cc=0.4742) | info on Rv1046c/- |
| Rv3100c/smpB | (cc=0.4617) | info on Rv3100c/smpB |
| Rv0654/- | (cc=0.4558) | info on Rv0654/- |
| Rv0802c/- | (cc=0.4521) | info on Rv0802c/- |
| Rv1040c/PE8 | (cc=0.4502) | info on Rv1040c/PE8 |
| Rv3445c/esxU | (cc=0.436) | info on Rv3445c/esxU |
| Rv3736/- | (cc=0.4354) | info on Rv3736/- |
| Rv1171/- | (cc=0.4257) | info on Rv1171/- |
| Rv1846c/blaI | (cc=0.4089) | info on Rv1846c/blaI |
Correlation of Rv3076/- with Rv3092c/-
Normalized LFCs for Rv3076/-:
(description and provenance of datasets)
| Rv3076/- | Rv3092c/- | |
| Fe_supp_jason_reseq | -1.953 | -0.603 |
| low_pH_jason_reseq | -1.307 | -0.619 |
| NO_jason_reseq | 0.223 | -0.186 |
| B6_jason_reseq | -0.578 | 0.108 |
| MHCII_jason_reseq | -1.963 | -0.022 |
| Isoniazid02 | 0.949 | 1.461 |
| Rifampicin4 | -0.114 | -0.368 |
| Ethambutol3 | 0.916 | 0.653 |
| Meropenem3 | -0.325 | 0.298 |
| Vancomycin16 | -0.403 | 0.223 |
| Rv2680_day32 | -0.725 | -1.456 |
| H37Rv_KO_MarP | -0.159 | -0.027 |
| hypoxia_3wks | 0.339 | -0.327 |
| hypoxia_6wks | -0.106 | -0.303 |
| glycerol | -2.481 | -1.181 |
| cholesterol | -1.547 | -0.622 |
| AJ | 0.419 | 0.059 |
| Bibs02 | 0.682 | -0.004 |
| Bibs02c | 0.709 | 0.767 |
| BL6 | -2.221 | -0.075 |
| BL6a | 0.548 | 0.594 |
| BXD01 | -0.183 | -0.069 |
| BXD010 | -2.116 | -0.159 |
| BXD011 | -2.105 | -0.574 |
| BXD03 | -1.16 | 0.197 |
| BXD04 | -0.66 | 0.222 |
| BXD05 | -0.179 | 0.01 |
| BXD06 | -0.975 | -0.08 |
| BXD07 | -1.305 | 0.022 |
| BXD08 | 0.24 | 0.496 |
| BXD09 | -0.736 | -0.253 |
| CAST | 0.133 | 0.245 |
| CCcont | -1.281 | -0.166 |
| DS01 | -0.072 | 0.055 |
| DS02 | -0.458 | 0.095 |
| DS04 | 0.124 | 1.226 |
| DS0c | 0.863 | 0.423 |
| GP01 | -1.122 | 0.084 |
| GP02 | -1.125 | 0.128 |
| GP0c | 0.202 | 0.311 |
| NOD | -1.09 | -0.096 |
| NZO | 1.246 | 0.157 |
| PWK | -0.171 | -0.227 |
| H37Rv_KO_CtpC | -1.762 | -0.258 |
| H37Rv_KO_CtpD | -2.209 | 0.364 |
| H37Rv_KO_Rv1272 | -1.846 | 0.077 |
| H37Rv_KO_SugABC | 0.769 | -0.21 |
| H37Rv_KO_MbtN | -1.83 | -0.128 |
| Trans05 | -3.354 | -0.318 |
| macrophage_unactivated | -0.06 | 0.657 |
| IL1 | -0.418 | 0.647 |
| Rapamycin | 0.448 | 0.881 |
| Tcell | -0.326 | 0.779 |
| GMCSF | 0.05 | 0.28 |
| IFNab | 0.747 | 0.795 |
| IFNg | -0.492 | 0.81 |
| IFNg_GMCSF1 | 1.213 | 0.126 |
| Rv1432_day32 | 0.301 | 0.549 |
| Rv1565c_day32 | 0.599 | 0.077 |
| secA2_input | -0.131 | -0.019 |
| delta_Rv3594 | -2.213 | -0.805 |
| delta_Rv3717 | -0.243 | -0.141 |
| delta_Rv3811 | -0.98 | -0.669 |
| delta_Rv0954 | -2.406 | -0.216 |
| PonA1 | 0.908 | 0.252 |
| EccD1_KO | 0.753 | 0.51 |
| EspI_KO | -0.419 | 0.225 |
| PE35_KO | -2.211 | 0.149 |
| PPE68_KO | -0.87 | 0.291 |
| glycerol2 | -0.289 | 0.478 |
| lignocerate | -0.237 | 1.055 |
| oleate | 0.312 | 0.398 |
| phosphatidylcholine | 0.263 | 0.864 |
| acetate | -0.256 | -0.105 |
| glucAc | -1.629 | 0.305 |
| Rv0950ko | 0.669 | 0.492 |
| Rv1096ko | 1.601 | 0.0 |
| Rv3684ko | -0.269 | 0.052 |
| delta_otsA_trehalose | -0.762 | 0.016 |