Top 10 genes with highest correlation to Rv3017c/esxQ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2570/- | (cc=0.5152) | info on Rv2570/- |
| Rv2083/- | (cc=0.5151) | info on Rv2083/- |
| Rv2042c/- | (cc=0.5001) | info on Rv2042c/- |
| Rv1966/mce3A | (cc=0.4968) | info on Rv1966/mce3A |
| Rv2543/lppA | (cc=0.4841) | info on Rv2543/lppA |
| Rv2435c/- | (cc=0.4742) | info on Rv2435c/- |
| Rv1354c/- | (cc=0.4737) | info on Rv1354c/- |
| Rv1975/- | (cc=0.4566) | info on Rv1975/- |
| Rv1949c/- | (cc=0.4506) | info on Rv1949c/- |
| Rv2576c/- | (cc=0.4484) | info on Rv2576c/- |
Correlation of Rv3017c/esxQ with Rv2570/-
Normalized LFCs for Rv3017c/esxQ:
(description and provenance of datasets)
| Rv3017c/esxQ | Rv2570/- | |
| Fe_supp_jason_reseq | -0.273 | 0.283 |
| low_pH_jason_reseq | -0.157 | -0.109 |
| NO_jason_reseq | 0.465 | 0.357 |
| B6_jason_reseq | -0.203 | -0.836 |
| MHCII_jason_reseq | 0.223 | -0.564 |
| Isoniazid02 | 1.099 | 0.135 |
| Rifampicin4 | 0.108 | -0.931 |
| Ethambutol3 | 1.217 | 3.807 |
| Meropenem3 | 0.268 | -0.883 |
| Vancomycin16 | 0.114 | -0.825 |
| Rv2680_day32 | -0.576 | -0.047 |
| H37Rv_KO_MarP | 0.785 | 0.365 |
| hypoxia_3wks | 0.331 | -0.283 |
| hypoxia_6wks | 0.01 | -1.132 |
| glycerol | 0.262 | 0.407 |
| cholesterol | 0.122 | 1.387 |
| AJ | -0.128 | 1.239 |
| Bibs02 | 0.801 | 1.927 |
| Bibs02c | 0.54 | -0.321 |
| BL6 | -0.617 | -2.467 |
| BL6a | 0.631 | 0.151 |
| BXD01 | -0.138 | -0.648 |
| BXD010 | -0.33 | 0.57 |
| BXD011 | 0.291 | -0.02 |
| BXD03 | -0.349 | 0.656 |
| BXD04 | 0.272 | -0.896 |
| BXD05 | 0.396 | -0.539 |
| BXD06 | -0.305 | -0.36 |
| BXD07 | -0.232 | -0.238 |
| BXD08 | 0.318 | -0.179 |
| BXD09 | 0.009 | -0.165 |
| CAST | 0.242 | 0.072 |
| CCcont | -0.915 | -2.66 |
| DS01 | 0.84 | 1.001 |
| DS02 | 0.485 | 0.654 |
| DS04 | -0.121 | -1.015 |
| DS0c | 0.454 | 0.068 |
| GP01 | -0.514 | 1.502 |
| GP02 | 0.913 | 2.478 |
| GP0c | -0.291 | 1.302 |
| NOD | 1.198 | -0.225 |
| NZO | 0.117 | 0.062 |
| PWK | 0.045 | 1.138 |
| H37Rv_KO_CtpC | 1.144 | 0.564 |
| H37Rv_KO_CtpD | -0.248 | -1.044 |
| H37Rv_KO_Rv1272 | 0.636 | 1.566 |
| H37Rv_KO_SugABC | -0.826 | 1.261 |
| H37Rv_KO_MbtN | 1.13 | -1.461 |
| Trans05 | 1.318 | 3.287 |
| macrophage_unactivated | 0.398 | -1.509 |
| IL1 | -0.033 | -1.735 |
| Rapamycin | 0.7 | -2.955 |
| Tcell | -0.375 | 0.235 |
| GMCSF | -0.098 | -2.181 |
| IFNab | -0.399 | 0.323 |
| IFNg | -0.657 | -0.529 |
| IFNg_GMCSF1 | 0.773 | -1.04 |
| Rv1432_day32 | 0.027 | 0.421 |
| Rv1565c_day32 | 0.242 | 0.415 |
| secA2_input | -0.167 | -1.542 |
| delta_Rv3594 | -0.076 | 0.488 |
| delta_Rv3717 | -0.242 | -0.216 |
| delta_Rv3811 | -0.15 | 0.531 |
| delta_Rv0954 | -1.138 | -0.557 |
| PonA1 | -1.031 | -0.263 |
| EccD1_KO | -0.171 | 1.865 |
| EspI_KO | 1.66 | 3.522 |
| PE35_KO | 0.82 | 2.891 |
| PPE68_KO | 0.774 | 2.473 |
| glycerol2 | -0.422 | -1.892 |
| lignocerate | -0.58 | -2.484 |
| oleate | -0.058 | -0.58 |
| phosphatidylcholine | -0.057 | -1.377 |
| acetate | -1.647 | -2.151 |
| glucAc | -1.625 | -4.829 |
| Rv0950ko | 0.473 | -0.865 |
| Rv1096ko | -0.44 | -0.145 |
| Rv3684ko | -0.609 | -1.182 |
| delta_otsA_trehalose | 0.555 | 0.243 |