Top 10 genes with highest correlation to Rv2944/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1999c/- | (cc=0.5981) | info on Rv1999c/- |
| Rv2943A/- | (cc=0.5501) | info on Rv2943A/- |
| Rv1846c/blaI | (cc=0.5446) | info on Rv1846c/blaI |
| Rv2007c/fdxA | (cc=0.5377) | info on Rv2007c/fdxA |
| Rv3037c/- | (cc=0.5226) | info on Rv3037c/- |
| Rv1880c/cyp140 | (cc=0.5193) | info on Rv1880c/cyp140 |
| Rv2872/vapC43 | (cc=0.5155) | info on Rv2872/vapC43 |
| Rv1036c/- | (cc=0.5149) | info on Rv1036c/- |
| Rv3354/- | (cc=0.5127) | info on Rv3354/- |
| Rv2237A/- | (cc=0.5068) | info on Rv2237A/- |
Correlation of Rv2944/- with Rv1999c/-
Normalized LFCs for Rv2944/-:
(description and provenance of datasets)
| Rv2944/- | Rv1999c/- | |
| Fe_supp_jason_reseq | 0.027 | 0.032 |
| low_pH_jason_reseq | -0.773 | -0.609 |
| NO_jason_reseq | -0.045 | 0.239 |
| B6_jason_reseq | -0.315 | -0.061 |
| MHCII_jason_reseq | 0.26 | 0.316 |
| Isoniazid02 | 0.434 | 0.188 |
| Rifampicin4 | 0.46 | 0.628 |
| Ethambutol3 | 0.477 | 0.17 |
| Meropenem3 | -0.036 | -0.29 |
| Vancomycin16 | 0.589 | 0.032 |
| Rv2680_day32 | 0.668 | 0.398 |
| H37Rv_KO_MarP | -0.196 | -0.042 |
| hypoxia_3wks | -0.183 | -0.227 |
| hypoxia_6wks | -0.144 | -0.397 |
| glycerol | -1.267 | -0.499 |
| cholesterol | -0.279 | -0.351 |
| AJ | -0.867 | -0.097 |
| Bibs02 | -0.159 | 0.007 |
| Bibs02c | 0.405 | -0.088 |
| BL6 | -0.571 | -0.925 |
| BL6a | 0.0 | -0.676 |
| BXD01 | -0.732 | -0.679 |
| BXD010 | -1.608 | -0.928 |
| BXD011 | 0.197 | -0.795 |
| BXD03 | -2.313 | -0.578 |
| BXD04 | -1.408 | -0.7 |
| BXD05 | 0.097 | -1.079 |
| BXD06 | -1.381 | -0.89 |
| BXD07 | -1.068 | -0.664 |
| BXD08 | 0.084 | -0.867 |
| BXD09 | -0.979 | -0.907 |
| CAST | -0.247 | -0.35 |
| CCcont | -0.598 | -0.974 |
| DS01 | 0.7 | 0.053 |
| DS02 | 1.133 | 0.118 |
| DS04 | 1.054 | 0.333 |
| DS0c | -0.369 | -0.515 |
| GP01 | -0.603 | 0.218 |
| GP02 | -0.925 | -0.615 |
| GP0c | -2.105 | -0.365 |
| NOD | -1.822 | -0.202 |
| NZO | -0.276 | -0.228 |
| PWK | -0.313 | -0.359 |
| H37Rv_KO_CtpC | -1.99 | -1.177 |
| H37Rv_KO_CtpD | 0.41 | -0.724 |
| H37Rv_KO_Rv1272 | 0.735 | -0.021 |
| H37Rv_KO_SugABC | -0.076 | -0.338 |
| H37Rv_KO_MbtN | -1.428 | -0.29 |
| Trans05 | 0.191 | -0.035 |
| macrophage_unactivated | -1.935 | -0.038 |
| IL1 | -0.056 | -0.522 |
| Rapamycin | -0.295 | -0.623 |
| Tcell | -0.714 | -0.238 |
| GMCSF | 0.372 | 0.356 |
| IFNab | 0.218 | -0.78 |
| IFNg | -1.638 | -0.505 |
| IFNg_GMCSF1 | 1.64 | 0.072 |
| Rv1432_day32 | 0.98 | 0.248 |
| Rv1565c_day32 | 0.662 | 0.122 |
| secA2_input | -0.034 | -0.374 |
| delta_Rv3594 | -0.147 | -0.021 |
| delta_Rv3717 | -0.39 | 0.216 |
| delta_Rv3811 | -0.595 | 0.326 |
| delta_Rv0954 | 0.872 | -0.335 |
| PonA1 | -0.054 | -0.308 |
| EccD1_KO | 0.293 | 0.296 |
| EspI_KO | -0.066 | -0.088 |
| PE35_KO | 1.593 | 0.63 |
| PPE68_KO | 1.104 | 0.31 |
| glycerol2 | 0.581 | 0.765 |
| lignocerate | 0.872 | 0.848 |
| oleate | 0.274 | 0.119 |
| phosphatidylcholine | 0.581 | 0.899 |
| acetate | 1.155 | 0.648 |
| glucAc | 0.628 | 0.925 |
| Rv0950ko | -0.057 | 0.199 |
| Rv1096ko | 0.112 | -0.13 |
| Rv3684ko | 1.104 | 0.445 |
| delta_otsA_trehalose | 0.843 | 0.475 |