Top 10 genes with highest correlation to Rv2838c/rbfA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2966c/- | (cc=0.5375) | info on Rv2966c/- |
| Rv0806c/cpsY | (cc=0.5245) | info on Rv0806c/cpsY |
| Rv0813c/- | (cc=0.5227) | info on Rv0813c/- |
| Rv2827c/- | (cc=0.5033) | info on Rv2827c/- |
| Rv3266c/rmlD | (cc=0.4877) | info on Rv3266c/rmlD |
| Rv1829/- | (cc=0.4714) | info on Rv1829/- |
| Rv2245/kasA | (cc=0.4713) | info on Rv2245/kasA |
| Rv1003/- | (cc=0.4696) | info on Rv1003/- |
| Rv1075c/- | (cc=0.4627) | info on Rv1075c/- |
| Rv2837c/- | (cc=0.452) | info on Rv2837c/- |
Correlation of Rv2838c/rbfA with Rv2966c/-
Normalized LFCs for Rv2838c/rbfA:
(description and provenance of datasets)
| Rv2838c/rbfA | Rv2966c/- | |
| Fe_supp_jason_reseq | 0.538 | 2.671 |
| low_pH_jason_reseq | -0.167 | -0.634 |
| NO_jason_reseq | 0.244 | 0.0 |
| B6_jason_reseq | -0.649 | -0.421 |
| MHCII_jason_reseq | -0.572 | -0.236 |
| Isoniazid02 | 0.0 | 1.011 |
| Rifampicin4 | 0.653 | -0.309 |
| Ethambutol3 | 0.764 | -0.795 |
| Meropenem3 | 0.289 | -3.068 |
| Vancomycin16 | 0.0 | -1.785 |
| Rv2680_day32 | -0.554 | 0.359 |
| H37Rv_KO_MarP | -1.865 | -1.82 |
| hypoxia_3wks | 0.0 | -0.478 |
| hypoxia_6wks | 0.0 | -1.539 |
| glycerol | 0.0 | 2.126 |
| cholesterol | 0.0 | 1.371 |
| AJ | 0.0 | -0.919 |
| Bibs02 | -0.183 | -0.878 |
| Bibs02c | -0.209 | -0.376 |
| BL6 | -0.125 | -0.839 |
| BL6a | -0.198 | -0.112 |
| BXD01 | -0.13 | -0.874 |
| BXD010 | -0.128 | -0.859 |
| BXD011 | 0.116 | -0.505 |
| BXD03 | -0.135 | 0.072 |
| BXD04 | -0.124 | -0.222 |
| BXD05 | -0.135 | -0.533 |
| BXD06 | -0.133 | -0.426 |
| BXD07 | -0.138 | -0.929 |
| BXD08 | -0.133 | -0.892 |
| BXD09 | -0.14 | -0.557 |
| CAST | -0.23 | -0.913 |
| CCcont | 0.0 | 1.63 |
| DS01 | -0.236 | -0.133 |
| DS02 | 0.199 | -1.045 |
| DS04 | 0.339 | 1.296 |
| DS0c | -0.217 | -1.042 |
| GP01 | -0.099 | -0.662 |
| GP02 | -0.083 | -0.558 |
| GP0c | -0.13 | -0.872 |
| NOD | -0.225 | 1.434 |
| NZO | -0.199 | -1.139 |
| PWK | -0.196 | -0.942 |
| H37Rv_KO_CtpC | -0.162 | -0.292 |
| H37Rv_KO_CtpD | 0.116 | 0.068 |
| H37Rv_KO_Rv1272 | -0.141 | -0.559 |
| H37Rv_KO_SugABC | 0.321 | 0.364 |
| H37Rv_KO_MbtN | 0.469 | 2.759 |
| Trans05 | -0.131 | -0.151 |
| macrophage_unactivated | 0.0 | 0.701 |
| IL1 | 0.0 | -0.78 |
| Rapamycin | 0.0 | 0.239 |
| Tcell | 0.0 | 0.0 |
| GMCSF | 0.0 | -0.217 |
| IFNab | 0.0 | 1.255 |
| IFNg | 0.0 | -0.97 |
| IFNg_GMCSF1 | 0.0 | -0.534 |
| Rv1432_day32 | -0.999 | -0.763 |
| Rv1565c_day32 | 0.0 | -0.269 |
| secA2_input | 1.39 | -0.902 |
| delta_Rv3594 | 2.14 | 4.026 |
| delta_Rv3717 | 2.82 | 3.729 |
| delta_Rv3811 | 2.421 | 2.919 |
| delta_Rv0954 | 2.31 | 2.362 |
| PonA1 | 0.145 | 0.56 |
| EccD1_KO | 3.2 | 0.98 |
| EspI_KO | 2.193 | 0.85 |
| PE35_KO | -1.263 | 0.98 |
| PPE68_KO | 0.33 | 1.795 |
| glycerol2 | 0.0 | -2.287 |
| lignocerate | 0.0 | -1.527 |
| oleate | 0.0 | -1.484 |
| phosphatidylcholine | 0.0 | -1.606 |
| acetate | 0.0 | -0.078 |
| glucAc | 0.0 | -0.81 |
| Rv0950ko | 0.844 | 0.256 |
| Rv1096ko | -0.157 | 0.0 |
| Rv3684ko | -1.831 | -1.248 |
| delta_otsA_trehalose | -1.296 | -0.232 |