Top 10 genes with highest correlation to Rv2820c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1706c/PPE23 | (cc=0.5043) | info on Rv1706c/PPE23 |
| Rv2059/- | (cc=0.4941) | info on Rv2059/- |
| Rv1632c/- | (cc=0.4885) | info on Rv1632c/- |
| Rv2629/- | (cc=0.4749) | info on Rv2629/- |
| Rv1290c/- | (cc=0.4675) | info on Rv1290c/- |
| Rv3136A/- | (cc=0.4647) | info on Rv3136A/- |
| Rv2505c/fadD35 | (cc=0.4578) | info on Rv2505c/fadD35 |
| Rv0257/- | (cc=0.4502) | info on Rv0257/- |
| Rv0959/- | (cc=0.445) | info on Rv0959/- |
| Rv1123c/bpoB | (cc=0.4353) | info on Rv1123c/bpoB |
Correlation of Rv2820c/- with Rv1706c/PPE23
Normalized LFCs for Rv2820c/-:
(description and provenance of datasets)
| Rv2820c/- | Rv1706c/PPE23 | |
| Fe_supp_jason_reseq | 0.633 | -0.759 |
| low_pH_jason_reseq | 0.42 | -0.356 |
| NO_jason_reseq | 0.257 | 0.011 |
| B6_jason_reseq | 0.456 | -0.189 |
| MHCII_jason_reseq | -0.014 | -0.046 |
| Isoniazid02 | 1.772 | 0.806 |
| Rifampicin4 | 0.076 | 0.298 |
| Ethambutol3 | 2.23 | 0.345 |
| Meropenem3 | -0.125 | 0.098 |
| Vancomycin16 | 0.496 | 0.188 |
| Rv2680_day32 | -0.012 | -0.618 |
| H37Rv_KO_MarP | -0.474 | -0.195 |
| hypoxia_3wks | 0.419 | 0.395 |
| hypoxia_6wks | -0.021 | -0.203 |
| glycerol | -0.162 | -1.1 |
| cholesterol | -0.597 | -0.975 |
| AJ | 0.173 | 0.084 |
| Bibs02 | 0.518 | -0.13 |
| Bibs02c | -0.447 | -0.553 |
| BL6 | 0.324 | -0.244 |
| BL6a | -0.443 | -0.693 |
| BXD01 | -0.021 | -0.38 |
| BXD010 | -1.021 | 0.04 |
| BXD011 | -0.124 | -0.244 |
| BXD03 | -0.869 | -0.33 |
| BXD04 | 0.019 | 0.02 |
| BXD05 | -0.494 | -0.159 |
| BXD06 | -0.064 | -0.527 |
| BXD07 | -0.207 | -0.03 |
| BXD08 | -0.164 | -0.251 |
| BXD09 | -0.579 | -0.475 |
| CAST | 0.035 | -0.03 |
| CCcont | -0.12 | -0.596 |
| DS01 | 0.496 | -0.407 |
| DS02 | 0.21 | -0.143 |
| DS04 | -0.124 | -0.607 |
| DS0c | 0.299 | -0.841 |
| GP01 | 1.296 | 0.483 |
| GP02 | 0.441 | 0.118 |
| GP0c | 0.443 | 0.034 |
| NOD | 0.052 | -0.272 |
| NZO | -0.078 | 0.236 |
| PWK | 0.624 | -0.026 |
| H37Rv_KO_CtpC | 0.479 | -0.22 |
| H37Rv_KO_CtpD | -0.123 | 0.441 |
| H37Rv_KO_Rv1272 | 0.63 | -0.325 |
| H37Rv_KO_SugABC | 1.068 | -0.159 |
| H37Rv_KO_MbtN | -0.1 | -0.073 |
| Trans05 | -0.243 | -0.605 |
| macrophage_unactivated | 0.739 | 0.584 |
| IL1 | 0.694 | 0.062 |
| Rapamycin | -0.43 | -0.104 |
| Tcell | 0.688 | 0.277 |
| GMCSF | 0.034 | 0.0 |
| IFNab | -0.514 | 0.1 |
| IFNg | 0.107 | -0.035 |
| IFNg_GMCSF1 | 0.804 | 0.041 |
| Rv1432_day32 | 0.755 | 0.074 |
| Rv1565c_day32 | 0.403 | 0.482 |
| secA2_input | -0.279 | -0.291 |
| delta_Rv3594 | 0.171 | -0.28 |
| delta_Rv3717 | -0.067 | 0.154 |
| delta_Rv3811 | -0.098 | 0.213 |
| delta_Rv0954 | 0.207 | 0.698 |
| PonA1 | 0.224 | 0.357 |
| EccD1_KO | 0.756 | 0.872 |
| EspI_KO | 1.309 | 1.067 |
| PE35_KO | 0.939 | 1.091 |
| PPE68_KO | 1.238 | 0.554 |
| glycerol2 | 0.425 | 0.511 |
| lignocerate | -0.032 | 0.281 |
| oleate | 0.543 | 0.852 |
| phosphatidylcholine | 0.245 | 0.725 |
| acetate | -0.346 | -0.09 |
| glucAc | -0.136 | -0.409 |
| Rv0950ko | 0.389 | 0.859 |
| Rv1096ko | -0.16 | 0.38 |
| Rv3684ko | 0.0 | 0.298 |
| delta_otsA_trehalose | -0.451 | -1.326 |