Top 10 genes with highest correlation to Rv2779c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0075/- | (cc=0.4842) | info on Rv0075/- |
| Rv2126c/PE_PGRS37 | (cc=0.4421) | info on Rv2126c/PE_PGRS37 |
| Rv3619c/esxV | (cc=0.4138) | info on Rv3619c/esxV |
| Rv2874/dipZ | (cc=0.412) | info on Rv2874/dipZ |
| Rv3095/- | (cc=0.4054) | info on Rv3095/- |
| Rv1632c/- | (cc=0.4009) | info on Rv1632c/- |
| Rv1879/- | (cc=0.3896) | info on Rv1879/- |
| Rv1290c/- | (cc=0.3891) | info on Rv1290c/- |
| Rv2505c/fadD35 | (cc=0.382) | info on Rv2505c/fadD35 |
| Rv2961/- | (cc=0.3797) | info on Rv2961/- |
Correlation of Rv2779c/- with Rv0075/-
Normalized LFCs for Rv2779c/-:
(description and provenance of datasets)
| Rv2779c/- | Rv0075/- | |
| Fe_supp_jason_reseq | -0.444 | -0.153 |
| low_pH_jason_reseq | -0.775 | -0.447 |
| NO_jason_reseq | 0.0 | 0.097 |
| B6_jason_reseq | 0.32 | 0.662 |
| MHCII_jason_reseq | 1.068 | 1.083 |
| Isoniazid02 | 0.447 | 0.825 |
| Rifampicin4 | 0.0 | 0.265 |
| Ethambutol3 | 2.244 | 1.492 |
| Meropenem3 | 0.086 | -0.273 |
| Vancomycin16 | 0.43 | -0.348 |
| Rv2680_day32 | -0.365 | -0.169 |
| H37Rv_KO_MarP | -0.222 | 0.46 |
| hypoxia_3wks | 0.439 | 0.255 |
| hypoxia_6wks | -0.305 | 0.75 |
| glycerol | -1.083 | -0.285 |
| cholesterol | -0.667 | 0.12 |
| AJ | 0.862 | -0.222 |
| Bibs02 | 0.628 | 0.481 |
| Bibs02c | -0.299 | 0.432 |
| BL6 | -0.352 | -0.236 |
| BL6a | 0.128 | 0.192 |
| BXD01 | 0.253 | -0.007 |
| BXD010 | -0.222 | -0.372 |
| BXD011 | 0.717 | -0.143 |
| BXD03 | -1.646 | -0.42 |
| BXD04 | -0.436 | -0.271 |
| BXD05 | 0.789 | -0.077 |
| BXD06 | 0.229 | 0.178 |
| BXD07 | 0.089 | -0.204 |
| BXD08 | -0.52 | -0.3 |
| BXD09 | 0.037 | -0.044 |
| CAST | -0.03 | 0.012 |
| CCcont | -0.903 | -0.505 |
| DS01 | -0.08 | 0.477 |
| DS02 | -0.197 | 0.022 |
| DS04 | -0.956 | 0.88 |
| DS0c | 1.186 | 0.83 |
| GP01 | -0.633 | -0.328 |
| GP02 | 0.432 | 1.227 |
| GP0c | 0.075 | -0.544 |
| NOD | 0.2 | 0.573 |
| NZO | -0.137 | -0.082 |
| PWK | 0.163 | -0.199 |
| H37Rv_KO_CtpC | -0.8 | -0.346 |
| H37Rv_KO_CtpD | -0.424 | 0.099 |
| H37Rv_KO_Rv1272 | -0.725 | 0.103 |
| H37Rv_KO_SugABC | -0.929 | -0.301 |
| H37Rv_KO_MbtN | -1.073 | -0.8 |
| Trans05 | -1.676 | 0.059 |
| macrophage_unactivated | -0.095 | -0.846 |
| IL1 | -0.955 | -0.392 |
| Rapamycin | -0.448 | 0.025 |
| Tcell | 0.433 | -0.14 |
| GMCSF | 0.716 | -0.576 |
| IFNab | -0.441 | -0.659 |
| IFNg | 0.404 | -0.329 |
| IFNg_GMCSF1 | 0.214 | -0.625 |
| Rv1432_day32 | -0.136 | -0.24 |
| Rv1565c_day32 | -1.349 | -0.324 |
| secA2_input | 0.124 | 0.412 |
| delta_Rv3594 | -0.483 | -0.875 |
| delta_Rv3717 | -1.133 | -0.357 |
| delta_Rv3811 | -1.605 | -0.669 |
| delta_Rv0954 | 0.145 | -0.199 |
| PonA1 | -1.214 | -0.28 |
| EccD1_KO | 1.256 | 0.086 |
| EspI_KO | 1.215 | 0.245 |
| PE35_KO | -0.263 | -0.026 |
| PPE68_KO | -0.442 | 0.355 |
| glycerol2 | -0.174 | -0.024 |
| lignocerate | -0.444 | -0.094 |
| oleate | 0.184 | 0.047 |
| phosphatidylcholine | 0.203 | -0.221 |
| acetate | -0.366 | -0.128 |
| glucAc | -0.57 | -0.542 |
| Rv0950ko | -2.177 | -0.431 |
| Rv1096ko | -1.218 | -0.486 |
| Rv3684ko | -1.68 | -0.141 |
| delta_otsA_trehalose | -0.711 | -0.064 |