Top 10 genes with highest correlation to Rv2626c/hrp1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0914c/- | (cc=0.5643) | info on Rv0914c/- |
| Rv0396/- | (cc=0.5067) | info on Rv0396/- |
| Rv3445c/esxU | (cc=0.4699) | info on Rv3445c/esxU |
| Rv1084/- | (cc=0.4643) | info on Rv1084/- |
| Rv2872/vapC43 | (cc=0.4544) | info on Rv2872/vapC43 |
| Rv2616/- | (cc=0.4503) | info on Rv2616/- |
| Rv0233/nrdB | (cc=0.4354) | info on Rv0233/nrdB |
| Rv0435c/- | (cc=0.4317) | info on Rv0435c/- |
| Rv3107c/agpS | (cc=0.429) | info on Rv3107c/agpS |
| Rv0449c/- | (cc=0.4269) | info on Rv0449c/- |
Correlation of Rv2626c/hrp1 with Rv0914c/-
Normalized LFCs for Rv2626c/hrp1:
(description and provenance of datasets)
| Rv2626c/hrp1 | Rv0914c/- | |
| Fe_supp_jason_reseq | -1.099 | 0.264 |
| low_pH_jason_reseq | 0.11 | 0.53 |
| NO_jason_reseq | 0.144 | 0.289 |
| B6_jason_reseq | -0.512 | 0.9 |
| MHCII_jason_reseq | -0.214 | 1.272 |
| Isoniazid02 | 0.445 | -0.453 |
| Rifampicin4 | 0.07 | 0.157 |
| Ethambutol3 | -0.049 | -0.378 |
| Meropenem3 | 0.289 | 0.2 |
| Vancomycin16 | 0.52 | 0.478 |
| Rv2680_day32 | -3.275 | -1.695 |
| H37Rv_KO_MarP | 0.642 | 0.509 |
| hypoxia_3wks | 0.69 | 0.319 |
| hypoxia_6wks | -0.449 | -0.065 |
| glycerol | -3.032 | -0.913 |
| cholesterol | -1.459 | -0.512 |
| AJ | -1.304 | 0.089 |
| Bibs02 | 0.505 | -0.827 |
| Bibs02c | -0.787 | -0.594 |
| BL6 | -0.919 | -1.486 |
| BL6a | -1.316 | -1.083 |
| BXD01 | -2.844 | -1.172 |
| BXD010 | -1.344 | -0.826 |
| BXD011 | -1.97 | -1.499 |
| BXD03 | -2.561 | -1.526 |
| BXD04 | -1.591 | -1.597 |
| BXD05 | -1.805 | -0.898 |
| BXD06 | -1.693 | -1.799 |
| BXD07 | -2.05 | -1.234 |
| BXD08 | -1.86 | -0.887 |
| BXD09 | -1.063 | -1.291 |
| CAST | -1.742 | 0.315 |
| CCcont | -2.379 | -1.536 |
| DS01 | 0.188 | 0.811 |
| DS02 | -1.465 | 0.625 |
| DS04 | 0.29 | 0.682 |
| DS0c | 0.889 | 0.108 |
| GP01 | 0.257 | -0.3 |
| GP02 | -0.96 | -1.785 |
| GP0c | -0.789 | -0.838 |
| NOD | 0.529 | 0.291 |
| NZO | -0.72 | -0.097 |
| PWK | -0.341 | 0.091 |
| H37Rv_KO_CtpC | -1.799 | -0.724 |
| H37Rv_KO_CtpD | -3.129 | -2.503 |
| H37Rv_KO_Rv1272 | -0.343 | -0.961 |
| H37Rv_KO_SugABC | -1.757 | -0.286 |
| H37Rv_KO_MbtN | -0.847 | -1.36 |
| Trans05 | -0.227 | 0.021 |
| macrophage_unactivated | -2.156 | -0.556 |
| IL1 | 0.104 | -0.329 |
| Rapamycin | 0.35 | -0.58 |
| Tcell | -1.079 | -1.03 |
| GMCSF | -0.795 | -0.993 |
| IFNab | -0.221 | -1.091 |
| IFNg | -0.965 | -0.73 |
| IFNg_GMCSF1 | -0.723 | 0.182 |
| Rv1432_day32 | 1.073 | 0.242 |
| Rv1565c_day32 | 0.0 | 0.899 |
| secA2_input | 1.565 | 0.485 |
| delta_Rv3594 | -1.06 | 0.528 |
| delta_Rv3717 | -0.2 | 0.064 |
| delta_Rv3811 | -2.003 | 0.238 |
| delta_Rv0954 | 0.01 | 0.393 |
| PonA1 | -1.264 | 0.65 |
| EccD1_KO | -2.092 | 0.273 |
| EspI_KO | -0.125 | 0.399 |
| PE35_KO | 0.242 | -0.219 |
| PPE68_KO | -0.688 | 0.038 |
| glycerol2 | -2.756 | -0.371 |
| lignocerate | -1.178 | 0.089 |
| oleate | -2.447 | -0.647 |
| phosphatidylcholine | -1.997 | -0.434 |
| acetate | 0.409 | -0.047 |
| glucAc | -1.141 | 0.582 |
| Rv0950ko | -0.582 | 0.522 |
| Rv1096ko | 2.41 | 0.814 |
| Rv3684ko | 0.517 | 1.497 |
| delta_otsA_trehalose | -1.929 | 0.0 |