Top 10 genes with highest correlation to Rv2356c/PPE40:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3650/PE33 | (cc=0.5562) | info on Rv3650/PE33 |
| Rv3858c/gltD | (cc=0.5221) | info on Rv3858c/gltD |
| Rv1918c/PPE35 | (cc=0.5179) | info on Rv1918c/PPE35 |
| Rv2735c/- | (cc=0.4971) | info on Rv2735c/- |
| Rv2190c/- | (cc=0.4896) | info on Rv2190c/- |
| Rv3489/- | (cc=0.4793) | info on Rv3489/- |
| Rv2067c/- | (cc=0.4614) | info on Rv2067c/- |
| Rv2678c/hemE | (cc=0.4582) | info on Rv2678c/hemE |
| Rv1507A/- | (cc=0.4471) | info on Rv1507A/- |
| Rv3425/PPE57 | (cc=0.4463) | info on Rv3425/PPE57 |
Correlation of Rv2356c/PPE40 with Rv3650/PE33
Normalized LFCs for Rv2356c/PPE40:
(description and provenance of datasets)
| Rv2356c/PPE40 | Rv3650/PE33 | |
| Fe_supp_jason_reseq | 0.65 | 3.01 |
| low_pH_jason_reseq | 0.139 | 2.212 |
| NO_jason_reseq | -0.984 | -1.78 |
| B6_jason_reseq | -0.202 | -0.214 |
| MHCII_jason_reseq | 0.447 | -0.663 |
| Isoniazid02 | -0.036 | 1.394 |
| Rifampicin4 | 0.701 | 0.812 |
| Ethambutol3 | 0.102 | -0.14 |
| Meropenem3 | -0.138 | 0.386 |
| Vancomycin16 | 0.403 | 0.971 |
| Rv2680_day32 | 0.677 | 0.803 |
| H37Rv_KO_MarP | 0.102 | 0.147 |
| hypoxia_3wks | -0.471 | 1.029 |
| hypoxia_6wks | -0.405 | 1.777 |
| glycerol | -0.121 | -0.554 |
| cholesterol | 0.105 | -0.398 |
| AJ | 0.257 | -0.637 |
| Bibs02 | 0.147 | 1.249 |
| Bibs02c | 0.456 | -0.174 |
| BL6 | 0.519 | 1.909 |
| BL6a | 0.587 | 2.986 |
| BXD01 | -0.225 | 3.607 |
| BXD010 | 0.189 | 1.662 |
| BXD011 | 0.829 | 2.278 |
| BXD03 | 0.435 | 1.623 |
| BXD04 | 0.67 | 4.115 |
| BXD05 | 0.87 | 3.431 |
| BXD06 | 0.547 | 2.714 |
| BXD07 | 0.111 | 3.558 |
| BXD08 | -0.177 | 3.925 |
| BXD09 | 0.316 | 3.04 |
| CAST | -0.158 | 0.501 |
| CCcont | 0.049 | 2.967 |
| DS01 | -0.431 | 0.0 |
| DS02 | 0.274 | 1.976 |
| DS04 | -0.169 | -0.533 |
| DS0c | 0.107 | -0.379 |
| GP01 | -0.034 | 0.444 |
| GP02 | 0.378 | 2.625 |
| GP0c | -0.477 | 0.888 |
| NOD | -0.905 | -0.617 |
| NZO | 0.016 | -0.548 |
| PWK | -0.499 | -0.539 |
| H37Rv_KO_CtpC | 0.105 | 2.905 |
| H37Rv_KO_CtpD | 0.384 | 1.193 |
| H37Rv_KO_Rv1272 | 0.847 | -0.117 |
| H37Rv_KO_SugABC | -0.295 | -0.272 |
| H37Rv_KO_MbtN | 0.957 | 5.572 |
| Trans05 | 0.635 | 3.09 |
| macrophage_unactivated | 0.546 | 0.77 |
| IL1 | 0.0 | 0.955 |
| Rapamycin | 0.117 | 4.195 |
| Tcell | -0.293 | 1.147 |
| GMCSF | 0.364 | -0.9 |
| IFNab | -0.429 | 1.451 |
| IFNg | 0.128 | 4.918 |
| IFNg_GMCSF1 | 0.676 | 0.346 |
| Rv1432_day32 | 0.018 | -2.639 |
| Rv1565c_day32 | -0.504 | -1.651 |
| secA2_input | -1.141 | -1.722 |
| delta_Rv3594 | 0.626 | 4.006 |
| delta_Rv3717 | -0.292 | 2.037 |
| delta_Rv3811 | 0.544 | 2.687 |
| delta_Rv0954 | 0.686 | 1.862 |
| PonA1 | 0.329 | -0.56 |
| EccD1_KO | -0.816 | -2.983 |
| EspI_KO | -0.836 | -0.773 |
| PE35_KO | -0.802 | -3.661 |
| PPE68_KO | -0.851 | -2.902 |
| glycerol2 | -0.153 | 2.036 |
| lignocerate | -0.056 | 1.867 |
| oleate | -0.109 | -1.117 |
| phosphatidylcholine | -0.343 | 0.854 |
| acetate | 0.595 | 2.986 |
| glucAc | 0.061 | 2.521 |
| Rv0950ko | -0.139 | -2.844 |
| Rv1096ko | -0.561 | -0.492 |
| Rv3684ko | -0.524 | -0.462 |
| delta_otsA_trehalose | 0.269 | 0.75 |