Top 10 genes with highest correlation to Rv2241/aceE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2444c/rne | (cc=0.503) | info on Rv2444c/rne |
| Rv3024c/trmU | (cc=0.4833) | info on Rv3024c/trmU |
| Rv2338c/moeW | (cc=0.4774) | info on Rv2338c/moeW |
| Rv2135c/- | (cc=0.4644) | info on Rv2135c/- |
| Rv2869c/rip | (cc=0.4596) | info on Rv2869c/rip |
| Rv1008/tatD | (cc=0.4474) | info on Rv1008/tatD |
| Rv3419c/gcp | (cc=0.435) | info on Rv3419c/gcp |
| Rv2259/mscR | (cc=0.4319) | info on Rv2259/mscR |
| Rv3720/- | (cc=0.4301) | info on Rv3720/- |
| Rv2904c/rplS | (cc=0.4247) | info on Rv2904c/rplS |
Correlation of Rv2241/aceE with Rv2444c/rne
Normalized LFCs for Rv2241/aceE:
(description and provenance of datasets)
| Rv2241/aceE | Rv2444c/rne | |
| Fe_supp_jason_reseq | 3.471 | 0.279 |
| low_pH_jason_reseq | -0.848 | 0.872 |
| NO_jason_reseq | 3.555 | 1.25 |
| B6_jason_reseq | -1.298 | -0.795 |
| MHCII_jason_reseq | -0.926 | -1.175 |
| Isoniazid02 | -1.198 | -0.706 |
| Rifampicin4 | 1.037 | -0.29 |
| Ethambutol3 | -0.336 | 1.278 |
| Meropenem3 | -0.858 | -0.128 |
| Vancomycin16 | -1.157 | 0.265 |
| Rv2680_day32 | -0.359 | 0.0 |
| H37Rv_KO_MarP | -1.983 | -0.586 |
| hypoxia_3wks | -1.284 | -1.284 |
| hypoxia_6wks | -1.222 | -0.933 |
| glycerol | -0.554 | 0.157 |
| cholesterol | -0.398 | 0.864 |
| AJ | -0.405 | 1.276 |
| Bibs02 | -0.152 | 0.397 |
| Bibs02c | -0.574 | -0.365 |
| BL6 | 0.0 | 0.0 |
| BL6a | -0.165 | 0.154 |
| BXD01 | -0.109 | 0.365 |
| BXD010 | -0.352 | 0.875 |
| BXD011 | 0.099 | 1.82 |
| BXD03 | 1.032 | 1.317 |
| BXD04 | 0.347 | 0.737 |
| BXD05 | 0.377 | 0.605 |
| BXD06 | 0.796 | 1.533 |
| BXD07 | -0.115 | 0.761 |
| BXD08 | 0.0 | 1.816 |
| BXD09 | 0.109 | 0.557 |
| CAST | -0.192 | -0.402 |
| CCcont | 2.006 | 0.592 |
| DS01 | -0.648 | 0.352 |
| DS02 | -0.597 | 0.169 |
| DS04 | 0.0 | 1.405 |
| DS0c | -0.596 | 0.168 |
| GP01 | -0.271 | -0.082 |
| GP02 | -0.228 | -0.145 |
| GP0c | -0.227 | 0.888 |
| NOD | 0.174 | -0.187 |
| NZO | -0.166 | 0.298 |
| PWK | 1.34 | 2.404 |
| H37Rv_KO_CtpC | -0.135 | 0.731 |
| H37Rv_KO_CtpD | 0.189 | 0.098 |
| H37Rv_KO_Rv1272 | 0.0 | -0.246 |
| H37Rv_KO_SugABC | 0.591 | 1.373 |
| H37Rv_KO_MbtN | 1.313 | 0.9 |
| Trans05 | -0.109 | 0.779 |
| macrophage_unactivated | -1.016 | -0.795 |
| IL1 | -1.326 | -1.406 |
| Rapamycin | -1.795 | -0.988 |
| Tcell | -0.671 | 1.01 |
| GMCSF | -1.18 | -1.468 |
| IFNab | 0.281 | 0.0 |
| IFNg | -0.861 | -0.861 |
| IFNg_GMCSF1 | -1.405 | -1.747 |
| Rv1432_day32 | -0.884 | -1.304 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 0.82 | -0.146 |
| delta_Rv3594 | 0.156 | -1.253 |
| delta_Rv3717 | 0.074 | 1.067 |
| delta_Rv3811 | -0.473 | -0.665 |
| delta_Rv0954 | -0.786 | -1.558 |
| PonA1 | 1.419 | 0.35 |
| EccD1_KO | -1.246 | 0.286 |
| EspI_KO | -1.218 | 0.0 |
| PE35_KO | -0.335 | -0.271 |
| PPE68_KO | -0.118 | -0.298 |
| glycerol2 | -0.193 | -0.193 |
| lignocerate | -0.168 | -0.168 |
| oleate | -0.196 | -0.196 |
| phosphatidylcholine | -0.193 | -0.193 |
| acetate | -0.229 | 0.209 |
| glucAc | 0.0 | 0.249 |
| Rv0950ko | 0.045 | 0.235 |
| Rv1096ko | 0.0 | -0.513 |
| Rv3684ko | 0.282 | -0.557 |
| delta_otsA_trehalose | -1.139 | -0.746 |