Top 10 genes with highest correlation to Rv2199c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0712/- | (cc=0.5674) | info on Rv0712/- |
| Rv1109c/- | (cc=0.5608) | info on Rv1109c/- |
| Rv3160c/- | (cc=0.5226) | info on Rv3160c/- |
| Rv0464c/- | (cc=0.5197) | info on Rv0464c/- |
| Rv2475c/- | (cc=0.4842) | info on Rv2475c/- |
| Rv2469c/- | (cc=0.4718) | info on Rv2469c/- |
| Rv0296c/- | (cc=0.4594) | info on Rv0296c/- |
| Rv1428c/- | (cc=0.4574) | info on Rv1428c/- |
| Rv1448c/tal | (cc=0.4313) | info on Rv1448c/tal |
| Rv0216/- | (cc=0.4271) | info on Rv0216/- |
Correlation of Rv2199c/- with Rv0712/-
Normalized LFCs for Rv2199c/-:
(description and provenance of datasets)
| Rv2199c/- | Rv0712/- | |
| Fe_supp_jason_reseq | -0.088 | 0.398 |
| low_pH_jason_reseq | -1.35 | -1.066 |
| NO_jason_reseq | -5.287 | -3.898 |
| B6_jason_reseq | -0.978 | 0.84 |
| MHCII_jason_reseq | -2.269 | -1.194 |
| Isoniazid02 | -0.87 | -2.506 |
| Rifampicin4 | -0.219 | -0.06 |
| Ethambutol3 | -0.634 | -0.068 |
| Meropenem3 | -1.778 | 0.114 |
| Vancomycin16 | -0.289 | -0.875 |
| Rv2680_day32 | -1.488 | -0.588 |
| H37Rv_KO_MarP | -0.862 | 1.29 |
| hypoxia_3wks | 0.754 | -1.631 |
| hypoxia_6wks | -0.666 | -1.756 |
| glycerol | 0.803 | -0.546 |
| cholesterol | -2.168 | -1.745 |
| AJ | -1.948 | -1.724 |
| Bibs02 | -1.187 | -0.987 |
| Bibs02c | -0.776 | -1.716 |
| BL6 | -1.008 | -0.565 |
| BL6a | -0.298 | -1.01 |
| BXD01 | -0.021 | -1.235 |
| BXD010 | 0.238 | -0.615 |
| BXD011 | -0.444 | -0.407 |
| BXD03 | 0.433 | 0.096 |
| BXD04 | 1.333 | -0.594 |
| BXD05 | -0.797 | -0.051 |
| BXD06 | 0.0 | -0.33 |
| BXD07 | -0.135 | -0.31 |
| BXD08 | -0.326 | -0.678 |
| BXD09 | -0.584 | -0.675 |
| CAST | -2.574 | -1.627 |
| CCcont | 0.843 | 0.641 |
| DS01 | -1.336 | -0.583 |
| DS02 | 0.887 | -0.862 |
| DS04 | -2.169 | -1.93 |
| DS0c | -1.227 | 0.079 |
| GP01 | -1.478 | 0.843 |
| GP02 | -0.93 | -0.186 |
| GP0c | -0.345 | -0.447 |
| NOD | 0.0 | -0.503 |
| NZO | -2.322 | -1.984 |
| PWK | -1.789 | -1.12 |
| H37Rv_KO_CtpC | 1.138 | 0.059 |
| H37Rv_KO_CtpD | 0.928 | -0.436 |
| H37Rv_KO_Rv1272 | -0.876 | -1.101 |
| H37Rv_KO_SugABC | 1.325 | 0.582 |
| H37Rv_KO_MbtN | 1.44 | -0.766 |
| Trans05 | -0.575 | -0.705 |
| macrophage_unactivated | -0.65 | -0.48 |
| IL1 | -0.175 | 0.139 |
| Rapamycin | -0.632 | 0.0 |
| Tcell | 1.398 | 0.153 |
| GMCSF | -1.18 | -0.496 |
| IFNab | 0.493 | 0.46 |
| IFNg | 0.2 | -0.313 |
| IFNg_GMCSF1 | -0.185 | 0.0 |
| Rv1432_day32 | -1.824 | -0.806 |
| Rv1565c_day32 | -1.949 | -1.234 |
| secA2_input | 0.864 | 0.686 |
| delta_Rv3594 | -0.962 | 0.0 |
| delta_Rv3717 | -0.429 | -0.79 |
| delta_Rv3811 | 0.476 | 0.122 |
| delta_Rv0954 | 0.988 | 0.394 |
| PonA1 | -0.377 | 0.786 |
| EccD1_KO | 1.516 | 1.924 |
| EspI_KO | 1.594 | 0.893 |
| PE35_KO | 0.858 | 0.913 |
| PPE68_KO | 0.941 | 1.059 |
| glycerol2 | -1.092 | -0.518 |
| lignocerate | -2.568 | -0.648 |
| oleate | -0.991 | -0.38 |
| phosphatidylcholine | 0.31 | -0.819 |
| acetate | -0.359 | -0.577 |
| glucAc | -0.42 | -0.816 |
| Rv0950ko | 0.576 | 0.971 |
| Rv1096ko | -0.045 | 1.855 |
| Rv3684ko | -0.049 | 1.395 |
| delta_otsA_trehalose | 5.437 | 0.632 |