Top 10 genes with highest correlation to Rv2148c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0488/- | (cc=0.5141) | info on Rv0488/- |
| Rv2062c/cobN | (cc=0.5001) | info on Rv2062c/cobN |
| Rv1470/trxA | (cc=0.4892) | info on Rv1470/trxA |
| Rv1997/ctpF | (cc=0.4805) | info on Rv1997/ctpF |
| Rv0940c/- | (cc=0.4731) | info on Rv0940c/- |
| Rv2176/pknL | (cc=0.469) | info on Rv2176/pknL |
| Rv1489A/- | (cc=0.4616) | info on Rv1489A/- |
| Rv1970/lprM | (cc=0.457) | info on Rv1970/lprM |
| Rv0399c/lpqK | (cc=0.4471) | info on Rv0399c/lpqK |
| Rv2289/cdh | (cc=0.4457) | info on Rv2289/cdh |
Correlation of Rv2148c/- with Rv0488/-
Normalized LFCs for Rv2148c/-:
(description and provenance of datasets)
| Rv2148c/- | Rv0488/- | |
| Fe_supp_jason_reseq | 0.358 | 0.414 |
| low_pH_jason_reseq | -1.449 | -0.013 |
| NO_jason_reseq | -1.444 | -0.323 |
| B6_jason_reseq | -1.664 | 0.749 |
| MHCII_jason_reseq | -1.283 | 0.793 |
| Isoniazid02 | -2.775 | -1.829 |
| Rifampicin4 | -1.546 | 0.257 |
| Ethambutol3 | -1.882 | -1.35 |
| Meropenem3 | -2.37 | -1.118 |
| Vancomycin16 | -2.181 | -0.586 |
| Rv2680_day32 | -0.187 | 0.82 |
| H37Rv_KO_MarP | 0.401 | 0.219 |
| hypoxia_3wks | 0.148 | -1.244 |
| hypoxia_6wks | -0.503 | 0.123 |
| glycerol | -3.25 | -1.166 |
| cholesterol | -0.531 | -0.197 |
| AJ | -0.289 | 0.756 |
| Bibs02 | 0.322 | 0.636 |
| Bibs02c | 0.652 | 0.855 |
| BL6 | -0.478 | -0.052 |
| BL6a | 0.22 | 0.05 |
| BXD01 | -0.624 | -0.416 |
| BXD010 | -0.679 | 0.746 |
| BXD011 | -1.066 | -0.347 |
| BXD03 | -1.038 | 0.368 |
| BXD04 | -0.592 | -0.915 |
| BXD05 | -1.225 | -0.122 |
| BXD06 | -0.939 | -0.007 |
| BXD07 | -0.551 | 0.014 |
| BXD08 | -1.792 | -0.53 |
| BXD09 | -1.111 | -0.44 |
| CAST | -0.709 | 0.617 |
| CCcont | 0.078 | -0.265 |
| DS01 | 0.58 | 1.574 |
| DS02 | -0.405 | 1.241 |
| DS04 | 0.752 | 0.966 |
| DS0c | 0.809 | 1.381 |
| GP01 | -0.85 | -0.827 |
| GP02 | -0.568 | -0.615 |
| GP0c | 0.309 | -0.547 |
| NOD | -0.477 | -0.687 |
| NZO | 0.315 | -0.116 |
| PWK | -0.064 | -0.02 |
| H37Rv_KO_CtpC | -0.089 | 0.016 |
| H37Rv_KO_CtpD | -0.864 | 0.379 |
| H37Rv_KO_Rv1272 | 0.184 | 0.963 |
| H37Rv_KO_SugABC | 1.355 | 0.226 |
| H37Rv_KO_MbtN | 0.637 | 0.741 |
| Trans05 | -0.84 | -0.391 |
| macrophage_unactivated | -0.552 | -0.489 |
| IL1 | -0.383 | -1.771 |
| Rapamycin | -0.758 | -1.071 |
| Tcell | -0.205 | -0.593 |
| GMCSF | -0.111 | -0.605 |
| IFNab | -1.131 | 0.073 |
| IFNg | -1.296 | -0.69 |
| IFNg_GMCSF1 | -0.776 | 0.368 |
| Rv1432_day32 | -0.42 | 0.438 |
| Rv1565c_day32 | 0.032 | 0.035 |
| secA2_input | -1.072 | -0.099 |
| delta_Rv3594 | 0.993 | 0.355 |
| delta_Rv3717 | 0.318 | -0.279 |
| delta_Rv3811 | 0.635 | 0.067 |
| delta_Rv0954 | -1.565 | 0.039 |
| PonA1 | -2.377 | -0.32 |
| EccD1_KO | 0.97 | 0.247 |
| EspI_KO | 1.221 | 1.223 |
| PE35_KO | 0.639 | 0.315 |
| PPE68_KO | 1.305 | 0.285 |
| glycerol2 | -0.248 | 1.883 |
| lignocerate | 0.617 | 2.04 |
| oleate | -0.722 | 0.608 |
| phosphatidylcholine | 0.71 | 1.756 |
| acetate | 0.135 | 2.287 |
| glucAc | 0.524 | 1.932 |
| Rv0950ko | -0.694 | 0.745 |
| Rv1096ko | -0.651 | -0.507 |
| Rv3684ko | -0.894 | -0.406 |
| delta_otsA_trehalose | -0.276 | 0.152 |