Top 10 genes with highest correlation to Rv2043c/pncA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2189c/- | (cc=0.5403) | info on Rv2189c/- |
| Rv2502c/accD1 | (cc=0.5045) | info on Rv2502c/accD1 |
| Rv0168/yrbE1B | (cc=0.4674) | info on Rv0168/yrbE1B |
| Rv1939/- | (cc=0.4552) | info on Rv1939/- |
| Rv3678c/- | (cc=0.4514) | info on Rv3678c/- |
| Rv0338c/- | (cc=0.4437) | info on Rv0338c/- |
| Rv1269c/- | (cc=0.4343) | info on Rv1269c/- |
| Rv0797/- | (cc=0.4214) | info on Rv0797/- |
| Rv2200c/ctaC | (cc=0.4203) | info on Rv2200c/ctaC |
| Rv3079c/- | (cc=0.419) | info on Rv3079c/- |
Correlation of Rv2043c/pncA with Rv2189c/-
Normalized LFCs for Rv2043c/pncA:
(description and provenance of datasets)
| Rv2043c/pncA | Rv2189c/- | |
| Fe_supp_jason_reseq | 0.843 | 1.318 |
| low_pH_jason_reseq | 0.969 | -1.096 |
| NO_jason_reseq | -0.415 | -1.638 |
| B6_jason_reseq | 0.691 | 0.787 |
| MHCII_jason_reseq | 1.041 | -0.183 |
| Isoniazid02 | -0.359 | 0.509 |
| Rifampicin4 | 0.961 | -0.106 |
| Ethambutol3 | 1.525 | 2.839 |
| Meropenem3 | 0.198 | 0.795 |
| Vancomycin16 | 0.629 | 0.565 |
| Rv2680_day32 | -0.932 | -2.536 |
| H37Rv_KO_MarP | -0.663 | -1.168 |
| hypoxia_3wks | 0.821 | -0.287 |
| hypoxia_6wks | -0.668 | 0.211 |
| glycerol | 0.316 | 0.632 |
| cholesterol | 3.852 | 4.164 |
| AJ | -0.548 | 0.242 |
| Bibs02 | -1.166 | -0.878 |
| Bibs02c | -0.417 | -0.728 |
| BL6 | -0.478 | -0.508 |
| BL6a | -0.544 | -0.261 |
| BXD01 | -0.167 | -0.491 |
| BXD010 | -1.23 | -0.316 |
| BXD011 | -0.147 | -0.727 |
| BXD03 | 0.613 | 0.402 |
| BXD04 | -0.311 | 1.208 |
| BXD05 | -0.119 | -0.22 |
| BXD06 | -0.109 | -0.095 |
| BXD07 | 0.321 | -0.366 |
| BXD08 | -0.189 | 0.22 |
| BXD09 | -0.229 | -1.018 |
| CAST | -0.544 | 0.153 |
| CCcont | -0.651 | -1.232 |
| DS01 | -1.454 | -0.688 |
| DS02 | -1.615 | 0.131 |
| DS04 | -0.503 | -0.256 |
| DS0c | -1.312 | -0.479 |
| GP01 | -0.783 | -0.453 |
| GP02 | -0.738 | 0.447 |
| GP0c | -1.065 | -1.054 |
| NOD | -0.304 | -0.314 |
| NZO | 0.785 | 0.0 |
| PWK | -0.362 | -0.682 |
| H37Rv_KO_CtpC | -0.288 | -1.469 |
| H37Rv_KO_CtpD | -0.087 | 0.309 |
| H37Rv_KO_Rv1272 | -1.1 | -0.069 |
| H37Rv_KO_SugABC | 0.347 | 0.11 |
| H37Rv_KO_MbtN | -0.548 | -0.112 |
| Trans05 | -0.141 | -0.151 |
| macrophage_unactivated | 1.572 | 0.549 |
| IL1 | 0.335 | 0.036 |
| Rapamycin | 0.396 | -0.565 |
| Tcell | 0.883 | -0.375 |
| GMCSF | 1.072 | 0.895 |
| IFNab | 0.342 | -0.19 |
| IFNg | 1.433 | -0.845 |
| IFNg_GMCSF1 | 0.943 | -0.405 |
| Rv1432_day32 | 0.0 | -0.139 |
| Rv1565c_day32 | -1.014 | -0.941 |
| secA2_input | -1.154 | -0.302 |
| delta_Rv3594 | -0.41 | -2.504 |
| delta_Rv3717 | -0.736 | -1.669 |
| delta_Rv3811 | -0.653 | -1.2 |
| delta_Rv0954 | -1.107 | -0.102 |
| PonA1 | -0.152 | -0.589 |
| EccD1_KO | 1.401 | 1.108 |
| EspI_KO | 1.092 | 0.742 |
| PE35_KO | 1.566 | 0.216 |
| PPE68_KO | 1.261 | 0.294 |
| glycerol2 | -0.928 | -0.048 |
| lignocerate | -1.033 | 0.351 |
| oleate | -0.638 | 0.138 |
| phosphatidylcholine | -0.843 | 0.223 |
| acetate | -0.442 | -0.746 |
| glucAc | -0.529 | -0.464 |
| Rv0950ko | -0.145 | -1.173 |
| Rv1096ko | 0.688 | -0.878 |
| Rv3684ko | -0.999 | 0.344 |
| delta_otsA_trehalose | 0.27 | 0.965 |