Top 10 genes with highest correlation to Rv1921c/lppF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3538/- | (cc=0.489) | info on Rv3538/- |
| Rv1866/- | (cc=0.4783) | info on Rv1866/- |
| Rv1182/papA3 | (cc=0.469) | info on Rv1182/papA3 |
| Rv1676/- | (cc=0.4609) | info on Rv1676/- |
| Rv1632c/- | (cc=0.4435) | info on Rv1632c/- |
| Rv2105/- | (cc=0.4316) | info on Rv2105/- |
| Rv1115/- | (cc=0.4269) | info on Rv1115/- |
| Rv3335c/- | (cc=0.4265) | info on Rv3335c/- |
| Rv1394c/cyp132 | (cc=0.4197) | info on Rv1394c/cyp132 |
| Rv2015c/- | (cc=0.4174) | info on Rv2015c/- |
Correlation of Rv1921c/lppF with Rv3538/-
Normalized LFCs for Rv1921c/lppF:
(description and provenance of datasets)
| Rv1921c/lppF | Rv3538/- | |
| Fe_supp_jason_reseq | -0.055 | -0.199 |
| low_pH_jason_reseq | 1.548 | 1.64 |
| NO_jason_reseq | -0.11 | -1.864 |
| B6_jason_reseq | 0.649 | 1.087 |
| MHCII_jason_reseq | 0.378 | -0.08 |
| Isoniazid02 | 0.457 | -0.371 |
| Rifampicin4 | 0.1 | -1.378 |
| Ethambutol3 | 1.023 | 3.351 |
| Meropenem3 | 0.158 | -0.305 |
| Vancomycin16 | -0.241 | -0.931 |
| Rv2680_day32 | 0.438 | -0.376 |
| H37Rv_KO_MarP | 0.298 | 0.062 |
| hypoxia_3wks | 0.14 | -1.208 |
| hypoxia_6wks | 0.459 | -0.255 |
| glycerol | 0.086 | 0.592 |
| cholesterol | -0.269 | -2.077 |
| AJ | 0.308 | -0.533 |
| Bibs02 | 0.017 | -0.67 |
| Bibs02c | 0.303 | -0.518 |
| BL6 | 0.036 | -0.686 |
| BL6a | -0.029 | -0.768 |
| BXD01 | 0.161 | -1.266 |
| BXD010 | -0.363 | -1.397 |
| BXD011 | -0.267 | -1.444 |
| BXD03 | -0.291 | -2.02 |
| BXD04 | -0.1 | -1.402 |
| BXD05 | 0.039 | -2.501 |
| BXD06 | -0.019 | -2.601 |
| BXD07 | 0.281 | -1.834 |
| BXD08 | -0.08 | -1.761 |
| BXD09 | -0.159 | -2.099 |
| CAST | 0.152 | -1.919 |
| CCcont | -0.044 | 1.178 |
| DS01 | 0.332 | -1.071 |
| DS02 | 0.306 | -0.345 |
| DS04 | 0.028 | -1.493 |
| DS0c | 0.36 | -1.54 |
| GP01 | 0.374 | -1.416 |
| GP02 | 0.016 | -1.705 |
| GP0c | 0.289 | -1.314 |
| NOD | 0.278 | 2.21 |
| NZO | 0.23 | 0.223 |
| PWK | 0.571 | -1.228 |
| H37Rv_KO_CtpC | -0.14 | -1.705 |
| H37Rv_KO_CtpD | 0.886 | -1.551 |
| H37Rv_KO_Rv1272 | 0.911 | -0.487 |
| H37Rv_KO_SugABC | -0.429 | -1.93 |
| H37Rv_KO_MbtN | 1.082 | -0.515 |
| Trans05 | 0.168 | -0.818 |
| macrophage_unactivated | -0.543 | -2.607 |
| IL1 | -0.383 | -3.307 |
| Rapamycin | -0.193 | -2.338 |
| Tcell | -0.339 | -3.904 |
| GMCSF | 0.771 | -0.098 |
| IFNab | -0.571 | -1.445 |
| IFNg | -0.529 | -1.871 |
| IFNg_GMCSF1 | -0.999 | -3.764 |
| Rv1432_day32 | 0.289 | -2.48 |
| Rv1565c_day32 | -0.071 | -0.982 |
| secA2_input | 0.083 | 1.199 |
| delta_Rv3594 | 0.17 | 0.788 |
| delta_Rv3717 | 0.624 | 0.875 |
| delta_Rv3811 | 0.109 | 0.617 |
| delta_Rv0954 | -0.536 | 0.398 |
| PonA1 | -0.008 | 0.355 |
| EccD1_KO | 0.155 | 0.635 |
| EspI_KO | 0.456 | 0.445 |
| PE35_KO | 0.484 | -1.091 |
| PPE68_KO | 0.435 | -0.71 |
| glycerol2 | 0.57 | 1.822 |
| lignocerate | 0.609 | 2.468 |
| oleate | 0.586 | -0.537 |
| phosphatidylcholine | 0.668 | 1.882 |
| acetate | 0.078 | 2.509 |
| glucAc | 0.163 | 1.713 |
| Rv0950ko | 0.0 | 1.384 |
| Rv1096ko | 0.06 | 1.882 |
| Rv3684ko | -0.023 | 1.916 |
| delta_otsA_trehalose | -0.038 | 1.01 |