Top 10 genes with highest correlation to Rv1861/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0403c/mmpS1 | (cc=0.6291) | info on Rv0403c/mmpS1 |
| Rv3847/- | (cc=0.5899) | info on Rv3847/- |
| Rv3429/PPE59 | (cc=0.5875) | info on Rv3429/PPE59 |
| Rv3378c/- | (cc=0.5616) | info on Rv3378c/- |
| Rv0831c/- | (cc=0.5606) | info on Rv0831c/- |
| Rv1500/- | (cc=0.5592) | info on Rv1500/- |
| Rv1949c/- | (cc=0.5442) | info on Rv1949c/- |
| Rv1521/fadD25 | (cc=0.5418) | info on Rv1521/fadD25 |
| Rv1386/PE15 | (cc=0.5417) | info on Rv1386/PE15 |
| Rv3840/- | (cc=0.5397) | info on Rv3840/- |
Correlation of Rv1861/- with Rv0403c/mmpS1
Normalized LFCs for Rv1861/-:
(description and provenance of datasets)
| Rv1861/- | Rv0403c/mmpS1 | |
| Fe_supp_jason_reseq | -0.117 | 0.043 |
| low_pH_jason_reseq | -1.655 | -0.535 |
| NO_jason_reseq | 0.428 | 0.344 |
| B6_jason_reseq | -1.122 | -2.182 |
| MHCII_jason_reseq | -0.956 | -0.931 |
| Isoniazid02 | -0.723 | -0.153 |
| Rifampicin4 | -0.284 | 0.122 |
| Ethambutol3 | 0.428 | -0.152 |
| Meropenem3 | 1.029 | -0.15 |
| Vancomycin16 | -0.342 | 0.305 |
| Rv2680_day32 | 0.683 | -0.918 |
| H37Rv_KO_MarP | -0.428 | 0.079 |
| hypoxia_3wks | 0.63 | 0.905 |
| hypoxia_6wks | 1.165 | -0.198 |
| glycerol | -2.422 | -2.319 |
| cholesterol | -0.936 | -0.398 |
| AJ | 0.155 | -0.079 |
| Bibs02 | 0.057 | 0.854 |
| Bibs02c | -1.555 | 0.136 |
| BL6 | -0.072 | -0.141 |
| BL6a | -0.35 | 0.722 |
| BXD01 | 0.581 | 0.757 |
| BXD010 | 0.628 | 0.411 |
| BXD011 | 0.659 | 0.87 |
| BXD03 | 0.255 | 1.436 |
| BXD04 | 0.521 | 0.891 |
| BXD05 | -0.009 | 0.582 |
| BXD06 | 0.903 | 0.821 |
| BXD07 | 0.9 | 0.524 |
| BXD08 | 0.989 | 0.862 |
| BXD09 | 0.753 | 0.778 |
| CAST | 0.31 | 0.15 |
| CCcont | -0.188 | -0.285 |
| DS01 | 0.445 | 0.325 |
| DS02 | -0.199 | 0.337 |
| DS04 | 0.604 | 1.098 |
| DS0c | 0.696 | 0.482 |
| GP01 | 0.859 | 0.647 |
| GP02 | 1.048 | 1.58 |
| GP0c | 0.809 | 0.391 |
| NOD | 0.861 | -0.187 |
| NZO | 0.334 | 0.529 |
| PWK | 0.527 | 0.415 |
| H37Rv_KO_CtpC | 1.449 | 0.807 |
| H37Rv_KO_CtpD | 1.112 | 0.656 |
| H37Rv_KO_Rv1272 | 0.338 | 0.592 |
| H37Rv_KO_SugABC | 1.671 | 0.938 |
| H37Rv_KO_MbtN | 0.74 | -0.329 |
| Trans05 | 0.734 | 1.176 |
| macrophage_unactivated | 0.12 | 0.335 |
| IL1 | -0.617 | -0.543 |
| Rapamycin | 0.0 | -0.908 |
| Tcell | -0.192 | 0.283 |
| GMCSF | -0.396 | -0.544 |
| IFNab | -0.453 | -0.723 |
| IFNg | -0.363 | -0.187 |
| IFNg_GMCSF1 | -0.167 | -1.496 |
| Rv1432_day32 | 0.386 | -0.089 |
| Rv1565c_day32 | 0.297 | -0.344 |
| secA2_input | -0.194 | -1.406 |
| delta_Rv3594 | -0.11 | -0.17 |
| delta_Rv3717 | -0.41 | -0.278 |
| delta_Rv3811 | -0.556 | -0.109 |
| delta_Rv0954 | 0.417 | 0.654 |
| PonA1 | -0.129 | 0.494 |
| EccD1_KO | -0.046 | -0.783 |
| EspI_KO | 0.22 | 0.602 |
| PE35_KO | -0.064 | -0.309 |
| PPE68_KO | 0.352 | -0.166 |
| glycerol2 | -0.149 | 0.161 |
| lignocerate | -0.505 | -0.567 |
| oleate | 0.411 | 0.457 |
| phosphatidylcholine | -0.101 | 0.245 |
| acetate | -0.427 | -1.2 |
| glucAc | -1.002 | -1.626 |
| Rv0950ko | 1.061 | 0.163 |
| Rv1096ko | -0.196 | -0.971 |
| Rv3684ko | -1.055 | -0.278 |
| delta_otsA_trehalose | 0.247 | -0.474 |