Top 10 genes with highest correlation to Rv1781c/malQ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2077c/- | (cc=0.588) | info on Rv2077c/- |
| Rv2742c/- | (cc=0.5286) | info on Rv2742c/- |
| Rv3065/mmr | (cc=0.5262) | info on Rv3065/mmr |
| Rv1923/lipD | (cc=0.5023) | info on Rv1923/lipD |
| Rv2079/- | (cc=0.4898) | info on Rv2079/- |
| Rv1045/- | (cc=0.4896) | info on Rv1045/- |
| Rv1263/amiB2 | (cc=0.4836) | info on Rv1263/amiB2 |
| Rv1774/- | (cc=0.4798) | info on Rv1774/- |
| Rv3508/PE_PGRS54 | (cc=0.4761) | info on Rv3508/PE_PGRS54 |
| Rv2022c/- | (cc=0.4731) | info on Rv2022c/- |
Correlation of Rv1781c/malQ with Rv2077c/-
Normalized LFCs for Rv1781c/malQ:
(description and provenance of datasets)
| Rv1781c/malQ | Rv2077c/- | |
| Fe_supp_jason_reseq | -0.549 | -0.658 |
| low_pH_jason_reseq | -0.54 | -0.442 |
| NO_jason_reseq | -0.105 | 0.249 |
| B6_jason_reseq | -0.496 | 0.26 |
| MHCII_jason_reseq | 0.452 | -0.431 |
| Isoniazid02 | -0.544 | -0.18 |
| Rifampicin4 | 0.468 | 0.043 |
| Ethambutol3 | -0.426 | -0.505 |
| Meropenem3 | 0.226 | -0.181 |
| Vancomycin16 | -0.398 | -0.143 |
| Rv2680_day32 | 0.656 | 0.272 |
| H37Rv_KO_MarP | 0.0 | 0.113 |
| hypoxia_3wks | -0.283 | 0.355 |
| hypoxia_6wks | -0.278 | 0.198 |
| glycerol | -0.072 | -0.357 |
| cholesterol | -0.311 | -0.385 |
| AJ | 0.094 | 0.161 |
| Bibs02 | 0.146 | 0.465 |
| Bibs02c | 0.565 | -0.064 |
| BL6 | -0.066 | 0.336 |
| BL6a | 0.093 | 0.116 |
| BXD01 | -0.443 | -0.309 |
| BXD010 | -0.096 | -0.019 |
| BXD011 | -0.209 | -0.142 |
| BXD03 | -0.541 | -0.295 |
| BXD04 | -0.546 | -0.317 |
| BXD05 | -0.174 | -0.128 |
| BXD06 | -0.589 | -0.031 |
| BXD07 | 0.042 | -0.215 |
| BXD08 | -0.192 | 0.13 |
| BXD09 | -0.446 | 0.032 |
| CAST | 0.279 | -0.367 |
| CCcont | -0.74 | -0.148 |
| DS01 | -0.214 | -0.195 |
| DS02 | -0.271 | -0.243 |
| DS04 | 0.513 | 0.195 |
| DS0c | -0.465 | -0.556 |
| GP01 | 0.99 | 0.514 |
| GP02 | 1.591 | 0.626 |
| GP0c | 0.908 | 0.205 |
| NOD | 0.451 | -0.096 |
| NZO | 0.153 | -0.101 |
| PWK | 0.273 | 0.409 |
| H37Rv_KO_CtpC | 0.177 | 0.304 |
| H37Rv_KO_CtpD | 0.714 | 0.53 |
| H37Rv_KO_Rv1272 | 0.246 | 0.412 |
| H37Rv_KO_SugABC | 0.576 | 0.799 |
| H37Rv_KO_MbtN | 0.174 | 0.307 |
| Trans05 | 0.428 | 0.764 |
| macrophage_unactivated | -0.237 | -0.06 |
| IL1 | -0.35 | 0.294 |
| Rapamycin | -0.123 | -0.325 |
| Tcell | -0.779 | -0.463 |
| GMCSF | -0.721 | -0.227 |
| IFNab | 0.0 | 0.042 |
| IFNg | 0.134 | 0.345 |
| IFNg_GMCSF1 | -0.292 | -0.544 |
| Rv1432_day32 | 0.57 | 0.143 |
| Rv1565c_day32 | -0.011 | 0.103 |
| secA2_input | 0.249 | 0.158 |
| delta_Rv3594 | -0.24 | -0.323 |
| delta_Rv3717 | 0.284 | -0.339 |
| delta_Rv3811 | 0.138 | -0.03 |
| delta_Rv0954 | 0.183 | 0.388 |
| PonA1 | -0.095 | 0.055 |
| EccD1_KO | -0.207 | -0.464 |
| EspI_KO | 0.282 | -0.268 |
| PE35_KO | -0.715 | -1.024 |
| PPE68_KO | -0.745 | -0.819 |
| glycerol2 | 0.502 | 0.928 |
| lignocerate | 0.436 | 0.906 |
| oleate | 0.384 | 0.808 |
| phosphatidylcholine | 0.65 | 1.206 |
| acetate | -0.057 | 0.527 |
| glucAc | -0.241 | 0.385 |
| Rv0950ko | -0.054 | 0.525 |
| Rv1096ko | 0.211 | 0.036 |
| Rv3684ko | -0.262 | 0.393 |
| delta_otsA_trehalose | -0.034 | 0.628 |