Top 10 genes with highest correlation to Rv1733c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3078/hab | (cc=0.5877) | info on Rv3078/hab |
| Rv2296/- | (cc=0.5323) | info on Rv2296/- |
| Rv2741/PE_PGRS47 | (cc=0.5159) | info on Rv2741/PE_PGRS47 |
| Rv0724A/- | (cc=0.5051) | info on Rv0724A/- |
| Rv2285/- | (cc=0.5035) | info on Rv2285/- |
| Rv3724A/cut5a | (cc=0.4883) | info on Rv3724A/cut5a |
| Rv3059/cyp136 | (cc=0.4824) | info on Rv3059/cyp136 |
| Rv0523c/- | (cc=0.4758) | info on Rv0523c/- |
| Rv3607c/folB | (cc=0.4732) | info on Rv3607c/folB |
| Rv2557/- | (cc=0.468) | info on Rv2557/- |
Correlation of Rv1733c/- with Rv3078/hab
Normalized LFCs for Rv1733c/-:
(description and provenance of datasets)
| Rv1733c/- | Rv3078/hab | |
| Fe_supp_jason_reseq | -4.963 | -2.251 |
| low_pH_jason_reseq | -2.784 | -0.842 |
| NO_jason_reseq | -0.609 | 0.336 |
| B6_jason_reseq | 0.128 | 0.061 |
| MHCII_jason_reseq | -0.017 | 0.791 |
| Isoniazid02 | -0.32 | 0.236 |
| Rifampicin4 | 0.162 | 0.038 |
| Ethambutol3 | 0.089 | -0.387 |
| Meropenem3 | 0.298 | -0.424 |
| Vancomycin16 | -0.358 | -0.528 |
| Rv2680_day32 | -0.435 | 0.393 |
| H37Rv_KO_MarP | -0.763 | -0.079 |
| hypoxia_3wks | -1.463 | -0.371 |
| hypoxia_6wks | -3.55 | -0.445 |
| glycerol | -2.017 | -0.193 |
| cholesterol | -0.435 | -0.505 |
| AJ | 0.212 | -0.103 |
| Bibs02 | -0.988 | 0.134 |
| Bibs02c | 0.726 | -0.944 |
| BL6 | -1.864 | -2.398 |
| BL6a | -0.346 | -1.758 |
| BXD01 | -1.445 | -2.412 |
| BXD010 | -0.026 | -0.772 |
| BXD011 | -1.747 | -2.897 |
| BXD03 | -1.781 | -1.217 |
| BXD04 | -2.163 | -3.003 |
| BXD05 | -1.821 | -2.153 |
| BXD06 | -1.688 | -1.919 |
| BXD07 | -1.347 | -1.651 |
| BXD08 | -2.327 | -3.23 |
| BXD09 | -1.046 | -2.602 |
| CAST | 0.167 | -0.304 |
| CCcont | -2.921 | -2.18 |
| DS01 | -0.236 | 0.183 |
| DS02 | -1.407 | -0.725 |
| DS04 | -0.877 | -1.698 |
| DS0c | 0.137 | 0.682 |
| GP01 | -2.033 | -1.441 |
| GP02 | -1.915 | -1.418 |
| GP0c | -0.258 | -2.251 |
| NOD | 2.128 | -0.255 |
| NZO | 1.508 | -0.191 |
| PWK | -0.274 | 0.202 |
| H37Rv_KO_CtpC | -2.354 | -0.773 |
| H37Rv_KO_CtpD | 0.974 | 1.488 |
| H37Rv_KO_Rv1272 | -1.934 | -3.875 |
| H37Rv_KO_SugABC | -1.97 | -0.636 |
| H37Rv_KO_MbtN | -1.803 | -0.815 |
| Trans05 | -2.645 | -3.919 |
| macrophage_unactivated | -1.291 | -2.396 |
| IL1 | 0.053 | -2.477 |
| Rapamycin | -3.716 | -1.697 |
| Tcell | -1.652 | -1.401 |
| GMCSF | -0.557 | 0.734 |
| IFNab | -0.828 | -0.877 |
| IFNg | -0.909 | 0.171 |
| IFNg_GMCSF1 | -0.927 | 0.456 |
| Rv1432_day32 | 0.343 | -0.372 |
| Rv1565c_day32 | -1.355 | 0.929 |
| secA2_input | 0.776 | 2.908 |
| delta_Rv3594 | 2.899 | 2.473 |
| delta_Rv3717 | 2.64 | 1.64 |
| delta_Rv3811 | 2.528 | 2.131 |
| delta_Rv0954 | 1.203 | 1.897 |
| PonA1 | -1.937 | 1.866 |
| EccD1_KO | 0.661 | 1.02 |
| EspI_KO | 2.33 | 2.133 |
| PE35_KO | 1.89 | 1.762 |
| PPE68_KO | 2.288 | 2.662 |
| glycerol2 | 1.16 | -1.24 |
| lignocerate | -0.604 | -1.371 |
| oleate | 2.025 | -0.478 |
| phosphatidylcholine | 0.487 | -0.737 |
| acetate | -1.736 | 1.807 |
| glucAc | -3.147 | -0.734 |
| Rv0950ko | 0.0 | -0.262 |
| Rv1096ko | -0.826 | 0.663 |
| Rv3684ko | -3.098 | -0.229 |
| delta_otsA_trehalose | -0.625 | 0.711 |