TnSeqCorr

Top 10 genes with highest correlation to Rv1693/-:
none

Correlation of Rv1693/- with Rv1693/-

Normalized LFCs for Rv1693/-:
(description and provenance of datasets)
Rv1693/-Rv1693/-
Fe_supp_jason_reseq

0.391

0.391

low_pH_jason_reseq

-0.181

-0.181

NO_jason_reseq

0.753

0.753

B6_jason_reseq

-0.69

-0.69

MHCII_jason_reseq

-1.289

-1.289

Isoniazid02

-0.631

-0.631

Rifampicin4

2.862

2.862

Ethambutol3

-0.626

-0.626

Meropenem3

1.016

1.016

Vancomycin16

-2.085

-2.085

Rv2680_day32

-2.622

-2.622

H37Rv_KO_MarP

-1.523

-1.523

hypoxia_3wks

-1.312

-1.312

hypoxia_6wks

0.781

0.781

glycerol

1.333

1.333

cholesterol

-1.192

-1.192

AJ

-2.403

-2.403

Bibs02

-0.713

-0.713

Bibs02c

-0.067

-0.067

BL6

0.372

0.372

BL6a

-0.684

-0.684

BXD01

-1.755

-1.755

BXD010

-0.813

-0.813

BXD011

-0.98

-0.98

BXD03

-0.858

-0.858

BXD04

-1.753

-1.753

BXD05

0.196

0.196

BXD06

-0.317

-0.317

BXD07

-1.41

-1.41

BXD08

-3.176

-3.176

BXD09

-0.334

-0.334

CAST

-1.41

-1.41

CCcont

0.313

0.313

DS01

0.058

0.058

DS02

0.244

0.244

DS04

-0.461

-0.461

DS0c

-0.731

-0.731

GP01

-2.905

-2.905

GP02

-2.448

-2.448

GP0c

-1.324

-1.324

NOD

-1.451

-1.451

NZO

-1.967

-1.967

PWK

-0.347

-0.347

H37Rv_KO_CtpC

-2.343

-2.343

H37Rv_KO_CtpD

-1.06

-1.06

H37Rv_KO_Rv1272

-2.531

-2.531

H37Rv_KO_SugABC

-2.25

-2.25

H37Rv_KO_MbtN

-1.714

-1.714

Trans05

-2.096

-2.096

macrophage_unactivated

0.047

0.047

IL1

2.45

2.45

Rapamycin

-0.69

-0.69

Tcell

-0.456

-0.456

GMCSF

1.761

1.761

IFNab

1.929

1.929

IFNg

-1.368

-1.368

IFNg_GMCSF1

2.064

2.064

Rv1432_day32

-2.374

-2.374

Rv1565c_day32

-0.055

-0.055

secA2_input

2.353

2.353

delta_Rv3594

-3.124

-3.124

delta_Rv3717

-1.423

-1.423

delta_Rv3811

-1.563

-1.563

delta_Rv0954

-3.498

-3.498

PonA1

-0.702

-0.702

EccD1_KO

1.986

1.986

EspI_KO

-0.573

-0.573

PE35_KO

1.951

1.951

PPE68_KO

2.764

2.764

glycerol2

0.0

0.0

lignocerate

0.0

0.0

oleate

0.0

0.0

phosphatidylcholine

0.0

0.0

acetate

0.0

0.0

glucAc

1.952

1.952

Rv0950ko

1.565

1.565

Rv1096ko

2.488

2.488

Rv3684ko

-1.081

-1.081

delta_otsA_trehalose

6.0

6.0