Top 10 genes with highest correlation to Rv1688/mpg:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2003c/- | (cc=0.6053) | info on Rv2003c/- |
| Rv0228/- | (cc=0.569) | info on Rv0228/- |
| Rv3062/ligB | (cc=0.5579) | info on Rv3062/ligB |
| Rv0325/- | (cc=0.5468) | info on Rv0325/- |
| Rv1323/fadA4 | (cc=0.5463) | info on Rv1323/fadA4 |
| Rv0080/- | (cc=0.5415) | info on Rv0080/- |
| Rv1736c/narX | (cc=0.538) | info on Rv1736c/narX |
| Rv2014/- | (cc=0.5353) | info on Rv2014/- |
| Rv2323c/- | (cc=0.5271) | info on Rv2323c/- |
| Rv2490c/PE_PGRS43 | (cc=0.5271) | info on Rv2490c/PE_PGRS43 |
Correlation of Rv1688/mpg with Rv2003c/-
Normalized LFCs for Rv1688/mpg:
(description and provenance of datasets)
| Rv1688/mpg | Rv2003c/- | |
| Fe_supp_jason_reseq | 0.268 | -0.644 |
| low_pH_jason_reseq | -0.38 | -0.683 |
| NO_jason_reseq | 0.824 | 0.958 |
| B6_jason_reseq | -0.417 | 0.567 |
| MHCII_jason_reseq | 0.891 | 1.288 |
| Isoniazid02 | 2.306 | 1.48 |
| Rifampicin4 | 1.497 | 0.59 |
| Ethambutol3 | 1.71 | 1.445 |
| Meropenem3 | 0.662 | 0.328 |
| Vancomycin16 | 1.151 | 0.942 |
| Rv2680_day32 | -0.108 | 0.46 |
| H37Rv_KO_MarP | 0.975 | 0.428 |
| hypoxia_3wks | 0.694 | -0.411 |
| hypoxia_6wks | 0.29 | -0.106 |
| glycerol | 0.771 | 0.054 |
| cholesterol | -0.055 | 0.026 |
| AJ | 0.419 | 0.94 |
| Bibs02 | 0.011 | -0.409 |
| Bibs02c | -0.62 | 0.465 |
| BL6 | -1.16 | -0.479 |
| BL6a | -1.56 | -1.164 |
| BXD01 | -1.418 | -0.808 |
| BXD010 | -2.414 | -1.305 |
| BXD011 | -1.055 | -1.822 |
| BXD03 | -1.403 | -1.378 |
| BXD04 | -1.531 | -1.683 |
| BXD05 | -0.167 | -0.57 |
| BXD06 | -1.341 | -1.648 |
| BXD07 | -0.711 | -0.978 |
| BXD08 | -0.779 | -1.014 |
| BXD09 | -0.693 | -0.397 |
| CAST | -0.399 | -1.208 |
| CCcont | -1.138 | -1.286 |
| DS01 | 0.014 | 0.436 |
| DS02 | -0.331 | 0.562 |
| DS04 | 1.172 | 0.25 |
| DS0c | -0.966 | -0.187 |
| GP01 | -1.184 | 1.201 |
| GP02 | -0.207 | 0.316 |
| GP0c | -0.555 | 0.104 |
| NOD | -1.087 | -0.635 |
| NZO | 0.49 | -0.172 |
| PWK | -0.163 | -0.395 |
| H37Rv_KO_CtpC | -1.556 | -0.479 |
| H37Rv_KO_CtpD | -0.529 | -1.419 |
| H37Rv_KO_Rv1272 | -1.535 | -0.761 |
| H37Rv_KO_SugABC | -2.165 | -1.911 |
| H37Rv_KO_MbtN | 0.678 | 0.859 |
| Trans05 | -1.445 | 0.093 |
| macrophage_unactivated | -0.95 | -0.675 |
| IL1 | 0.142 | 0.421 |
| Rapamycin | -0.396 | 0.957 |
| Tcell | 0.156 | 0.313 |
| GMCSF | -0.795 | 0.605 |
| IFNab | -0.076 | 0.076 |
| IFNg | -2.037 | -0.73 |
| IFNg_GMCSF1 | -0.079 | 0.229 |
| Rv1432_day32 | 1.197 | 0.052 |
| Rv1565c_day32 | 0.949 | 0.126 |
| secA2_input | -0.729 | -0.46 |
| delta_Rv3594 | 0.552 | 0.433 |
| delta_Rv3717 | 0.652 | 0.306 |
| delta_Rv3811 | -0.451 | 0.696 |
| delta_Rv0954 | 0.372 | -1.058 |
| PonA1 | 0.085 | -1.27 |
| EccD1_KO | 0.201 | -1.769 |
| EspI_KO | 0.208 | -0.137 |
| PE35_KO | 0.248 | -0.513 |
| PPE68_KO | 0.525 | -0.477 |
| glycerol2 | -0.556 | 0.771 |
| lignocerate | -0.537 | 0.582 |
| oleate | 0.301 | 0.072 |
| phosphatidylcholine | 0.244 | 1.003 |
| acetate | -0.308 | 1.242 |
| glucAc | 1.266 | 0.923 |
| Rv0950ko | -0.808 | -0.703 |
| Rv1096ko | 0.434 | 1.134 |
| Rv3684ko | 1.113 | 1.605 |
| delta_otsA_trehalose | -1.13 | -0.765 |